Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01844 ATGCCTCGTGGAACGCTTGAAGTTGTTCTGATCTGCGCCAAAAGCATTGAAAACAATGATTTTCTCTCTGACATAGATCCTTATGTGATTCTGACATATCGATCCCAGGAGCACAAGAGCACTGTAACTGAAAACGGAGGATCTAACCCACAGTGGAACCAGACATTTCTGTTCACAGTTTCTGATAGTGCTTCTGAACTTAATCTCAGGATAATGGACAAAGATAATTTTTCCAGTGATGATTTTCTTGGGGAGGCAACAGTTTCTTTAGAAGCAGTGTTTGCTGAGGGTAGCATCCCTGAAACTGCTTACTCTGTTGTCAAGGACCAAGAGTACTGCGGGGAGATTAAGGTGGCTCTCACTTTCAACCCAGAAGCTGAGAGAAGCATTGGGGAGGAGAATTATGGCGGATGGAAAGAATCAGAGGCCTG 431 0.4432 MPRGTLEVVLICAKSIENNDFLSDIDPYVILTYRSQEHKSTVTENGGSNPQWNQTFLFTVSDSASELNLRIMDKDNFSSDDFLGEATVSLEAVFAEGSIPETAYSVVKDQEYCGEIKVALTFNPEAERSIGEENYGGWKESEA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01844 143 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bva02g01844 143 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 142 - -
Bva02g01844 143 Gene3D C2 domain 2 125 IPR035892 -
Bva02g01844 143 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 127 IPR035892 -
Bva02g01844 143 Pfam C2 domain 4 98 IPR000008 -
Bva02g01844 143 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Bva02g01844 143 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01844 Bva-Chr2 20303612 20305151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01844 4 119 C2H2 Transcription Factor Family AT4G05330 30.172 7.35e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01844 - - gmx:100500006 218.009