Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01823 ATGAATATGATGCGAAGGCTGAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCTaGAGGGGATTCAAACACAAAGAGAGCTAAGGTTGATCAAGAAACTGAAGGAAAAGTCCGTGGGGCAACAAATCCTATTGAGAGAGGTGACGTGTCTCAGGGGCATCATATGGAGACAACAGAAGAAAATGCTGTTGGCACATCCAGTGTATCTACCGTAGCTAGAACAGAGAAATCAGGTTATGATCAGCTTCCAAAAGAGTTGCATGAAATGAGAATTAAAGACGACAAAGGcaacaaccaaaaagaaaagGATATAGTGGCAACTATCGTGAGTGGCAATGGAACAGAAACTGGTCAGATAATTACAACTGCTATTGGTGGTCAAGATGGACAACCAAAGCAGACAATCTCATACATGGCAGAACGCGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTTCCAGGCTAAGTGCCTTGAAACTGGTGAACAAGTTGCCATAAAGAAGGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTCCAGATCGTGCGCATGCTTGACCATCCCAATGTTGTTCAACTGAAGCATTGTTTCTTTTCCACTACCAATAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTACCGGAAACAGTCTATAAAGTTTCAAAGCATTGTATGAGGATGCACCAACATGTGCCTATCATAAATGTGCAACTGTATATGTACCAGATATGCCGTGCCCTAAATTATTTGCATCGCGTGGTGGGTGTCTGTCATCGTGATATCAAACCCCAGAATCTATTGGTTAATCCTCAGACTCATCAGCTAAAGATATGTGATTTTGGCAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCATATATCTGCTCACGATATTATAGAGCTCCGGAACTTATATTTGGGGCAACGGAATACACAAATGCTATTGATATGTGGTCTGCAGGCTGTGTTTTGGCTGAGCTTCTTCTAGGACAGccATTGTTTCCTGGGGAGAGTGGGGTTGATCAGTTGGTGGAAATCATTAAGATCTTGGGGACACCAACCAGGGAAGAAATCAAGTGCATGAATCCAAATTATACTGAATTTAAGTTTCCTCAGATTAAAGCGCGCCCATGGCACAAGGTTTTTCACAAGAGAATGCCTCCTGAAGCAGTGGATCTTGTGTCAAGGCTACTTCAGTATTCACCAAATCTACGTTGCACAGCGTTGGAAGCTTGTGCCCACCCCTTCTTTGATGATCTCAGAGACCCAAATGCATGTTTACCCAATGGGCGATCGCTACCTCCTTTGTTCAACTTTACAGCTCAAGaACTGGGTGGTGCATCTGCTGAGTTGCGTCATCGGCTGATTCCAGAGCACAGGAGGGTCTCCGTTGCCGAGCTTGCACAAGAATGGCTGGCTTCACAAATCTTAGGCTGTTTGTCAGGTGGATCAAGCCTGGTCCAACTCTTAAAATGTAGTTTATCATTCGATGAACTAAAACAAGTGCAACCTCAAGATATCCAGACGTCTCTATCTATCTCCTCAAATTA 1571 0.4322 MNMMRRLKSIASGRTSISSDPRGDSNTKRAKVDQETEGKVRGATNPIERGDVSQGHHMETTEENAVGTSSVSTVARTEKSGYDQLPKELHEMRIKDDKGNNQKEKDIVATIVSGNGTETGQIITTAIGGQDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIVRMLDHPNVVQLKHCFFSTTNKDELYLNLVLEYVPETVYKVSKHCMRMHQHVPIINVQLYMYQICRALNYLHRVVGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSAGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKARPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPNACLPNGRSLPPLFNFTAQELGGASAELRHRLIPEHRRVSVAELAQEWLASQILGCLSGGSSLVQLLKCSLSFDELKQVQPQDIQTSLSISSN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01823 523 CDD STKc_GSK3 135 427 IPR039192 -
Bva02g01823 523 MobiDBLite consensus disorder prediction 1 80 - -
Bva02g01823 523 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01823 523 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01823 523 PANTHER SHAGGY-LIKE KINASE 6 468 - -
Bva02g01823 523 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Bva02g01823 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Bva02g01823 523 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01823 523 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Bva02g01823 523 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 468 - -
Bva02g01823 523 MobiDBLite consensus disorder prediction 59 79 - -
Bva02g01823 523 MobiDBLite consensus disorder prediction 9 23 - -
Bva02g01823 523 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
Bva02g01823 523 SUPERFAMILY Protein kinase-like (PK-like) 139 449 IPR011009 -
Bva02g01823 523 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01823 Bva-Chr2 20224957 20230250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01823 146 427 Core Cell Cycle Gene Families AT1G76540 36.735 1.21e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bva02g01823 Pkinase 5.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01823 K00924 - gmx:100811346 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01823 02 20224957 20230250 Bva02g01823 02 20224957 20230250 ECH