Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01815 ATGGTGGAAGATGGAGATGGTGTTGCTGTCGATGCTCGTTCAACTGAAGACTGGTTGTTGCATGCGCAGGAGCTTGTGCCTGTGGCTCTTGGTAAGGCAAAAGAGGTTAAGGGCTTTCCTGGTAGGTGGAAGATGATCATTTCCAAATTAGAACAGATCCCATCTCGTTTATCGGACTTGTCAAGCCACCCTTGCTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTATCAAAAACTCTCAAGGAAGTCATTCGATTGTCTGAGTTATGTGTGAAGGAGAAGTATGAGGGCAAGCTTCAAATGCAGAGTGATCTTGATGCATTATCTGGGAAACTGGATTTGAACTTAAAGGATTGTGGCCTCTTGATCAAGACTGGTGTACTTGGTGAGGCTACTTTGCCTTTGGCCGTTTCTTGTCCCGTGGCCGAGTCAGATATTGCAGCACATAGCAATATAAGGGAATTGCTTGCGCGGCTTCAGATCGGGCACTTGGAAGCAAAGCACAGAGCTTTGGATAGTCTTGTTGAAGTTATGAAAGAGGATGAAAAGAGTGTCTTAACTGTTATGGGCAGGAGCAATATTGCTGCTTTAGTTCAATTGCTAACAGCAACATCTCCACGGATAAGGGAGAAGACTGTTACTGTTATATGCTCTCTTGCTGAATCAGGAAGCTGTGAGAATTGGTTAGTTTCTGAAGGCGTTCTTCCTCCTCTTATTAGACTTGTTGAATCAGGGAGTGCGGTGGGTAAAGAAAAGGCTACAATTTCTCTCCAGAGATTGTCAATGTCATCAGAAACAGCCCGTGCAATTGTTGGACATGGTGGGGTTCGTCCCCTAATTGAACTTTGTCAAACTGGTGATTCTGTTTCACAAGCTGCTGCTGCTTGTACTTTAAAGAATATATCAGCTGTTCCGGAGGTGCGGCAGGCACTGGCCGAAGAAGGGATTGTGAAGGTCATGATCAATCTCCTTAACTGTGGGATTCTATTGGGTGCAAAAGAGTATGCTGCAGAATGCCTGCAGAATCTCACCGCTAGCAATGACAATCTAAAAAGGTCTGTTATATCAGAAGGTGGTGTTAGAAGTCTTCTGGCTTATCTTGATGGTCCGCTTCCTCAAGAATCTGCGGTTGCAGCATTGAGGAATTTGATTGGATCAGTTTCTGAGGAAGTTTTAGTTTCTCTGGGTTTCCTTCCTCGATTGATTCACGTGCTAAAGTGTGGATCTTTAGGTGCTCAACAGGCTGCAGCATCTGCAATTTGCAAGGTTTGCAGCTCAAatgagatgaagaaaatggtTGGTGAAGCTGGGTTCATCCCTCTCCTTGTCAAGATGCTTGAGGCTAAATCAAACAGTGCGAGGGAGGTAGCTGCACAAGCAGTGGCGAGCCTGATGACGTTATCCCAGAATCGAAGAGAGGTCAAGAAAGATGATAAAAGCGTGCCAAATCTGGTGCAATTGCTTGATCCAAGTCCACAAAACACTGCCAAGAAATATGCAGTTTCCTGCCTTGGATCACTTTCTTCTAGTAAGAAATGTAAGAAGCTGATGATCTCATACGGAGCAATTGGGTATCTGAAGAAACTGACAGAGATGGACATCCCAGGAGCCAAGAAGCTACTCGAGCGATTGGAAAGAGGGAAATTGAGAAGCTTATTCAGCagaaaata 1679 0.4437 MVEDGDGVAVDARSTEDWLLHAQELVPVALGKAKEVKGFPGRWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLKEVIRLSELCVKEKYEGKLQMQSDLDALSGKLDLNLKDCGLLIKTGVLGEATLPLAVSCPVAESDIAAHSNIRELLARLQIGHLEAKHRALDSLVEVMKEDEKSVLTVMGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSSETARAIVGHGGVRPLIELCQTGDSVSQAAAACTLKNISAVPEVRQALAEEGIVKVMINLLNCGILLGAKEYAAECLQNLTASNDNLKRSVISEGGVRSLLAYLDGPLPQESAVAALRNLIGSVSEEVLVSLGFLPRLIHVLKCGSLGAQQAAASAICKVCSSNEMKKMVGEAGFIPLLVKMLEAKSNSAREVAAQAVASLMTLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLLERLERGKLRSLFSRK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01815 559 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 440 476 IPR000225 GO:0005515
Bva02g01815 559 Pfam Armadillo/beta-catenin-like repeat 267 306 IPR000225 GO:0005515
Bva02g01815 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 559 - -
Bva02g01815 559 SUPERFAMILY ARM repeat 155 536 IPR016024 -
Bva02g01815 559 Gene3D - 332 547 IPR011989 -
Bva02g01815 559 SMART arm_5 389 428 IPR000225 GO:0005515
Bva02g01815 559 SMART arm_5 266 306 IPR000225 GO:0005515
Bva02g01815 559 SMART arm_5 349 388 IPR000225 GO:0005515
Bva02g01815 559 SMART arm_5 470 512 IPR000225 GO:0005515
Bva02g01815 559 SMART arm_5 429 469 IPR000225 GO:0005515
Bva02g01815 559 SMART arm_5 184 224 IPR000225 GO:0005515
Bva02g01815 559 SMART arm_5 307 348 IPR000225 GO:0005515
Bva02g01815 559 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 236 278 IPR000225 GO:0005515
Bva02g01815 559 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 2 559 - -
Bva02g01815 559 Gene3D - 151 331 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01815 Bva-Chr2 20173182 20176708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01815 378 542 U-box Gene Family AT3G54790 28.743 1.04e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01815 - - gmx:100781453 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01815 02 20173182 20176708 Bva02g01815 02 20173182 20176708 ECH