Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01811 ATGTTGGGTTCAGGTACCAATATGATTACTACCATCATTGGGTTTGGCATGAGTGCGACTTTTATTGTATTTGTCTGCACAAGAATAATCTGTGGCAGACTACGAAGGAGCGTCGAATCACGAGCTTTGTTTGAGATTGAATCAAGAGCTGATATAGAACAGCCAGAACATCATGTTAATGCCGCCGAACCTGTTCTGGTTGCTGCAATCCCCACCATGAAGTTCAACCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTGATCTGTTTGGCAGagtacaaagaaagagaggtatTGCGCATCATGCCCAAATGCGGCCACAGCTTTCATCTTTCTTGCATTGATATGTGGCTGAGAAAACAATCTACCTGTCCAGTGTGCCGTTTGCCATTGCAAAATTCTTCTGAAACTAAACATGTGAGACCTGTAAGTGTGACATTTAGCGCTGGACATTCTCTTGAAGAGTCTCAAAGTTCTGAAGGAAATGCAGGTAGTGAAAGTCATGTTGAACCTATTCATAGTAACTCTTTGCAACCAGCTTCTGGAGAATCACATATTGAACCTATTTCTAGCAACCCATTTCAGCAAACTTCTTG 602 0.4103 MLGSGTNMITTIIGFGMSATFIVFVCTRIICGRLRRSVESRALFEIESRADIEQPEHHVNAAEPVLVAAIPTMKFNQEAFSSIEDTQCVICLAEYKEREVLRIMPKCGHSFHLSCIDMWLRKQSTCPVCRLPLQNSSETKHVRPVSVTFSAGHSLEESQSSEGNAGSESHVEPIHSNSLQPASGESHIEPISSNPFQQTS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01811 200 Pfam Ring finger domain 87 130 IPR001841 -
Bva02g01811 200 SUPERFAMILY RING/U-box 78 136 - -
Bva02g01811 200 MobiDBLite consensus disorder prediction 151 200 - -
Bva02g01811 200 PANTHER OS11G0150450 PROTEIN 1 179 - -
Bva02g01811 200 SMART ring_2 88 129 IPR001841 -
Bva02g01811 200 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Bva02g01811 200 CDD RING-H2_EL5_like 87 130 - -
Bva02g01811 200 PANTHER OS02G0676500 PROTEIN 1 179 - -
Bva02g01811 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 140 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01811 Bva-Chr2 20156577 20158768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01811 52 133 C3H Transcription Factor Family AT4G33565 38.095 4.19e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01811 - - gmx:100780922 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01811 02 20156577 20158768 Bva02g01811 02 20156577 20158768 ECH