Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01805 ATGGGGGTGGGAGGTAAATTCTGGGAACTACTGAAGCCTTACGCCCGAAACGAAGGCTTTGATTTCTTGAGGAACAAGCGAGTTGCTGTGGACCTCTCCTACTGGATTGTCCAGCACGGGAATGCTGTCAAAATCCCTGCTCTCAAACCTCATCTGCGGCTTACCTTCTTCCGCACCATCAATCTATTTTCCAAGTTTGGAGCCTTTCCAGTCTTCATTGTTGATGGGACTCCGTCACCATTGAAATCAGAGGCCAGGATTGCAAGATTTTTCCGATCTGCTGGCATTGAGTTAACTAGCTTGCCTGTGGTTGAAAAAGGTGTTTCTGTTGAGAGGAACCGTGCATTTTCAAGATATGTTCAAGAATGTGTGGAACTTGTTGAGTTACTGGGAATGCCTGTATTAAAGGCCAAAGGAGAGGCTGAAGCCCTTTGTGCCCAGTTAAATAATGAAGGCCATGTGGATGCTTGCATTACAGCTGATAGTGATGCGTTCCTCTTTGGGGCTAAATGTGTTATTAAATGTTTCCAGTCCAATTCTAAAGAACCATTTGAATGCTACAACATGTCAGATATTGAAGCTGGTCTTGGTTTGAAGAGGAAACACTTGATAGCTATCTCTCTTCTGGTTGGGAATGATCATGATATAAGTGGTGTTCAAGGGATTGGGGTTGATACAGCTCTTCGTTTTGTTCAAGCTTTCAGTGAAGATGACATATTGAATAGGTTACATGAGATAGGCAATGGGAACAGTTCACAATTTCCCAACATCATTATGTCTCCAGACACTAGTGCTGAGATGGATGGTAACTcgccaaaaacaaaacaacctCACTGCTTCTTCTGTGGTCATCCAGGCAGTAAAAGAGACCATACGAAGTCCTCCTGTGAAAATTGCAACACCAATGATGATGAAGGTTGCGTGAGAAAACCAGAGGGTTTCAAATGTGATTGCTTCTCTTGTGATATGAAGAGGAAACAGAAGGGACTGAAAAAGCTGGAAAATTGGCACACAAAAATTTGTCATAAGATTGCAAAGGAGCCAGATTTTCCCAAAGATGAAATCATCAAAATGTATCTATGCAATGACAATGGTTATTTTTCAGCAAATAATGGCCCTCGCATCTCATGGGGAAGACCAGACACTGAAATgttgattgaatttttaaacttcCATCAGCACTGGGATCCATCTTACATCCGGCAGCAAATTTTTCCTATGATGTCCACCATCTTCTTGAGGGATATGGCTAGTACTCCAGTGGAAAGTTTGTTATTTGGGCAATATGAATTTGATTCCATAAAACGTGTGAAGATAAGAAACGGAAATCGGGTTTATGTGGTCAAGTGGAAACGTGCAGTGGGAAACGCTACCTGTATAATTCCGTCAAATGAATCTGGCATACAAGAAGAATCAGAAGATGTTAGGGAGCTTGATGAATCAATAGATATACTGGATGATTCTGATGTTCCGGAGATTCATGTGGATCAAGGATATAGCTTTCTGCTGACAGATGAAAATACTGACCTTGTGACTGCTGCTTTTCCTGCAGAAGCTGAAAGGTTCAAGCGGGAACAGGAGCTGAAGGaattgaaaggaaagaatCCAACCCCAAGATCTCGAAAGAATGAAAACTCAGCATCACCAAACTCAAGAGATATCCAGCTAAACATTACGGAGTTCTTCCGTTCAACCAAAGTGCAGAATCAGCCAAAACAAAGGGAAGATCTGGATAAGAATCTTGACATTGAACAAAAAGGGACCTCAAAAGTGAAAAGGAAAGCGTCAAGCTCAAATCTTTCAAAATCTGCGAGGCGTCGCCTTTTATTTAACTA 1835 0.4087 MGVGGKFWELLKPYARNEGFDFLRNKRVAVDLSYWIVQHGNAVKIPALKPHLRLTFFRTINLFSKFGAFPVFIVDGTPSPLKSEARIARFFRSAGIELTSLPVVEKGVSVERNRAFSRYVQECVELVELLGMPVLKAKGEAEALCAQLNNEGHVDACITADSDAFLFGAKCVIKCFQSNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDISGVQGIGVDTALRFVQAFSEDDILNRLHEIGNGNSSQFPNIIMSPDTSAEMDGNSPKTKQPHCFFCGHPGSKRDHTKSSCENCNTNDDEGCVRKPEGFKCDCFSCDMKRKQKGLKKLENWHTKICHKIAKEPDFPKDEIIKMYLCNDNGYFSANNGPRISWGRPDTEMLIEFLNFHQHWDPSYIRQQIFPMMSTIFLRDMASTPVESLLFGQYEFDSIKRVKIRNGNRVYVVKWKRAVGNATCIIPSNESGIQEESEDVRELDESIDILDDSDVPEIHVDQGYSFLLTDENTDLVTAAFPAEAERFKREQELKELKGKNPTPRSRKNENSASPNSRDIQLNITEFFRSTKVQNQPKQREDLDKNLDIEQKGTSKVKRKASSSNLSKSARRRLLFN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01805 611 Gene3D - 198 261 - -
Bva02g01805 611 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Bva02g01805 611 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 414 IPR036279 -
Bva02g01805 611 MobiDBLite consensus disorder prediction 526 611 - -
Bva02g01805 611 MobiDBLite consensus disorder prediction 569 591 - -
Bva02g01805 611 Coils Coil 468 488 - -
Bva02g01805 611 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 599 IPR006084 -
Bva02g01805 611 CDD PIN_GEN1 2 202 - -
Bva02g01805 611 Gene3D - 2 197 - -
Bva02g01805 611 SMART xpgn3 1 96 IPR006085 GO:0004518
Bva02g01805 611 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Bva02g01805 611 MobiDBLite consensus disorder prediction 540 568 - -
Bva02g01805 611 Pfam XPG N-terminal domain 1 89 IPR006085 GO:0004518
Bva02g01805 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Bva02g01805 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Bva02g01805 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Bva02g01805 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Bva02g01805 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Bva02g01805 611 SMART xpgineu 128 198 IPR006086 GO:0004518
Bva02g01805 611 PANTHER FLAP ENDONUCLEASE GEN-LIKE 1 1 599 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01805 1 345 Core DNA Replication Machinery Family AT5G26680 25.263 6.13e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01805 K15338 - gmx:100779848 871.307