Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01792 ATGGCTGCTCATCAGAAACACGAAGTTGACGAAGACCAGGATCCACGAAACGTTGATCTTAGACTCGATGGCGGCGGCGCTGCAGTAGCAGAATTCATGACGGGGACCGTGAGGGGACCCAAAGAAGAGCCGAAAACGGATGAGAGATCGCCGGAGGCTATACGTGTCATGCCGGTGGCGGTGCACGTGCCCACGGGGATCTCCATGCAAGTCAGCAAAGCTTTGGGTCAGCCGCAGAAAAGGGCGTCCACCAAGGACAGGCACACCAAGGTCGAGGGACGAGGAAGGAGGATCCGAATGCCCGCCACGTGTGCAGCTCGGATCTTCCAGTTGACCCGGGAATTGGGGCACAAATCTGACGGCGAGACCATCCGGTGGCTCCTCGAACACGCTGAACCCGCCATCATAGCCGCCACTGGCACCGGGACTATTCCCGCCATCGCCATGTCCGTTAATGGGACCCTCAAAATCCCGACGACCCCTTCCACCATCAATACCAACAACCCGGGACCCGGCGACTCACCCGGAAAGAAGAAACGAAAGCGACCAGCAAACAGTGCATATATAGACATAAACGACGGCGTTTCAGTCTCCGCGGGACTTGCGCCAATAACCACGACCCCGACGGCAACAGCAAAGCcaaccaccaccaccaccacatCCATTGCTCAACCAGCAATTCCTTTAGCTCAAGGACTGGTACCCATGTGGGCAATCCCATCAAACGCCGTCGTTCCTGCAGGGACCTTCTTTGTGGTCCCTCCAATGACCCCCGTAGCCGGACCTTCCAACCAGCCACAGTTTTTTACAATCCCAGGCAATGTGACGCCGTTAATCAACATCTCGGCCAGACCCATCTCAGCTTTTGTCTCCTCCATGGCGAACATCGTCGCCCCTATGCAGCTCCAAGCAAGCTCTACTACCACAACAACTCCATGTTCCACCGCTCCGGCTTCGAAATCAGTCCCGGTTATGGCACCGAGCTCTAGCTCTGGTACAACTACAAGTACAACCCAGATGCTGAGAGATTTCTCATTGGAGATTTACGATAAGAAAGAGCTTCAGTTCATGTCTCACTCTTCGAAACATTA 1091 0.5408 MAAHQKHEVDEDQDPRNVDLRLDGGGAAVAEFMTGTVRGPKEEPKTDERSPEAIRVMPVAVHVPTGISMQVSKALGQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTIPAIAMSVNGTLKIPTTPSTINTNNPGPGDSPGKKKRKRPANSAYIDINDGVSVSAGLAPITTTPTATAKPTTTTTTSIAQPAIPLAQGLVPMWAIPSNAVVPAGTFFVVPPMTPVAGPSNQPQFFTIPGNVTPLINISARPISAFVSSMANIVAPMQLQASSTTTTTPCSTAPASKSVPVMAPSSSSGTTTSTTQMLRDFSLEIYDKKELQFMSHSSKH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01792 363 MobiDBLite consensus disorder prediction 1 19 - -
Bva02g01792 363 MobiDBLite consensus disorder prediction 1 52 - -
Bva02g01792 363 ProSiteProfiles TCP domain profile. 84 138 IPR017887 -
Bva02g01792 363 MobiDBLite consensus disorder prediction 158 184 - -
Bva02g01792 363 MobiDBLite consensus disorder prediction 72 94 - -
Bva02g01792 363 PANTHER TRANSCRIPTION FACTOR TCP9 38 363 - -
Bva02g01792 363 MobiDBLite consensus disorder prediction 307 337 - -
Bva02g01792 363 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 38 363 IPR005333 GO:0003700
Bva02g01792 363 MobiDBLite consensus disorder prediction 158 172 - -
Bva02g01792 363 Pfam TCP family transcription factor 83 156 IPR017887 -
Bva02g01792 363 MobiDBLite consensus disorder prediction 38 52 - -
Bva02g01792 363 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01792 Bva-Chr2 20050666 20052049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01792 1 363 TCP Transcription Factor Family AT2G45680 51.948 9.72e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva02g01792 TCP 3.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01792 - - cpap:110819421 390.963