Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01772 ATGCCATCCCGTCAGCCTTTGCCACCACTTCCGCCGGTGGCATCATCTTCTACCTCGCCGAGCCACTACCATCACCACCGCCAAGAATTAATCCTCGGCGGAGTTCTGGGTCTTGCTCTCCTGTTCCTAATCTTCATCATCTTTCTCACAATCTTCCTGTACCGCAAGCTCTCCTACAACCGCACCGCACCATTCGACCACTACAACCATCAGCAGCACCGCCGCTTCTCCTACACACTCCTACGACGCGCTACCAATTCGTTTTCCCCGGCTACCAAGCTCGGCCATGGTGGGTTCGGCTCCGTACACAAGGCTACCCTCCCTTCAGGTCTATCCGTGGCTCTGAAACTCATGGATTCCCCGGGTTCACTGCAAGGAGAGCGCGAGTTCCACAACGAGCTCTCACTCTCTTCGCAGCTCAACTCCCCTTATATACTCTCTCTTCTGGGATTCTCCTCTGATCGTCGAggtaaaaaactaattttggTCTATGAGCTCATGCCGAATGGCAGTTTGCAGGACGCGTTGTTGGATAGAAAGTGTGCGGAGCTCATGGAGTGGAAGAAGAGGTTCGATATTGTTGTTCACATCGCCAAGGGTATTGAATATCTTCACCATTATTGCAATCCGCCGGTGATTCATGGGGATATCAAGCCCAGTAATGTGTTGCTCGATTCCAATTTCTCAGCCAAAATTGGGGATTTTGGGCTAGCGAGGTTGAAAACAGAGGATCTGGAAATGGTGGAAGAGAATGGTGGAGAGGGTGAGAGtgtgaagaagaaggaagggGTTGTGGAGATAGGGGACGAAAATGGGTCAATTTTGGAAGAGGTGGAGAGTGTGACTACTGGGTTTGAAGAAGGTAGCGCAATGATTGATCGGTCGCCGGAGAGTTGCATGGTTAGGATTTTGGATCCAGAGGCTTCGCCGGAGACGGTGGTTCTGTCGCCCGAAGTGGGGGTTGATAAATCTAGTGTTTCGGAAACGTGCTTTGATAAGTTTAGCATTGATAGCGGGAAATATTTGACTGCGAATAGCCGGAAGAAGGGTGGTTCCGGCAGAGATTGGTGGTGGAAGCAAGACAATGGTGGAGGCTCCGAATCAGGGAGGGTGAAGGACTATGTGATGGAGTGGATCGGAAGTGAGATAAAGAAGGAGAGACCCAAGAGTGAATGGATCGCGTCTCCAAGCTCTTCAGAGACTAATGGAGCAACTCCAAAAATGGAGTTGAAGAAGCAGAGGAAGAGATTGGATTGGTGGGCTTCCctggatgaagaaaaaaaagggaagaagaaggagaagaaccGAAAGCCAAGGGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCtctcaaagaagaagaaaaaacgaAGCCTTGATTCTAATTGCGGGGGCGAATCGTGGTGGCAGAAAGACGAGGATGTGGTTCCacagcagaagaagaagagaaaaaacaagagTAGCAGAGGTAGCATTGATTGGTGGTTGGATGGTTTGAGTGGTGAATTCAGAACTGGAAGAAGAAATAGCCAAGATTGGGTTAGTGGGGATATTCCCAAGAGTGGTGGAATCAGTAGCACACCAAGCATGAGAGGAACTGTTTGTTACATTGCTCCTGAGTATGGTGGTGGTGGGCAGCTCTCTGAGAAGTGTGATGTCTATAGTTTTGGTGTATTGCTTTTAGTTTTGATAGCTGGAAGAcgacctcttcaagtaacaGCCTCGCCAATGTCAGAATTTGAAAGGGCTAATCTGATTTCATGGGCTAGACAACTTGCTCACAGTGGCAAGCTTTTGGATCTTGTTGATCCTTCCATCCATGCATTGGACAAGGAGCAGGCATTGCTTTGCATCACAATTGCCTTATTATGTCTTCAGAGATCGCCCGGTAAGAGGCCTACCATGAAAGAGATTGTAGAAATGCTCACTGGTGAGGCTGAGACACCCCACTTACCTTTTGAGTTCTCGCCGTCACCGCCCTCCAATTTTCTGTTCAAGTCCCGGAAGAAGGCTCGGTG 2018 0.4628 MPSRQPLPPLPPVASSSTSPSHYHHHRQELILGGVLGLALLFLIFIIFLTIFLYRKLSYNRTAPFDHYNHQQHRRFSYTLLRRATNSFSPATKLGHGGFGSVHKATLPSGLSVALKLMDSPGSLQGEREFHNELSLSSQLNSPYILSLLGFSSDRRGKKLILVYELMPNGSLQDALLDRKCAELMEWKKRFDIVVHIAKGIEYLHHYCNPPVIHGDIKPSNVLLDSNFSAKIGDFGLARLKTEDLEMVEENGGEGESVKKKEGVVEIGDENGSILEEVESVTTGFEEGSAMIDRSPESCMVRILDPEASPETVVLSPEVGVDKSSVSETCFDKFSIDSGKYLTANSRKKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKSEWIASPSSSETNGATPKMELKKQRKRLDWWASLDEEKKGKKKEKNRKPREWWKEEFCEELSKKKKKRSLDSNCGGESWWQKDEDVVPQQKKKRKNKSSRGSIDWWLDGLSGEFRTGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHSGKLLDLVDPSIHALDKEQALLCITIALLCLQRSPGKRPTMKEIVEMLTGEAETPHLPFEFSPSPPSNFLFKSRKKAR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01772 672 MobiDBLite consensus disorder prediction 650 672 - -
Bva02g01772 672 Pfam Protein tyrosine and serine/threonine kinase 92 251 IPR001245 GO:0004672|GO:0006468
Bva02g01772 672 PANTHER OS07G0586332 PROTEIN 1 672 IPR044576 -
Bva02g01772 672 Gene3D Phosphorylase Kinase; domain 1 61 166 - -
Bva02g01772 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bva02g01772 672 SMART serkin_6 88 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01772 672 MobiDBLite consensus disorder prediction 1 15 - -
Bva02g01772 672 PANTHER OS07G0586332 PROTEIN 1 672 - -
Bva02g01772 672 MobiDBLite consensus disorder prediction 1 21 - -
Bva02g01772 672 ProSiteProfiles Protein kinase domain profile. 88 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01772 672 MobiDBLite consensus disorder prediction 392 406 - -
Bva02g01772 672 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Bva02g01772 672 MobiDBLite consensus disorder prediction 344 369 - -
Bva02g01772 672 Pfam Protein kinase domain 527 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01772 672 Gene3D Transferase(Phosphotransferase) domain 1 502 650 - -
Bva02g01772 672 Gene3D Transferase(Phosphotransferase) domain 1 167 265 - -
Bva02g01772 672 MobiDBLite consensus disorder prediction 387 413 - -
Bva02g01772 672 SUPERFAMILY Protein kinase-like (PK-like) 65 660 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01772 Bva-Chr2 19936777 19939151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01772 520 643 Receptor kinase-like Gene Family AT3G58690 37.692 2.77e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Bva02g01772 PK_Tyr_Ser-Thr 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01772 - - jre:108999501 924.465