Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01762 ATGAAAATGGACTGGGAAGGGAAGATGGAGGATATTGATGGCAAGACGGGTCTGATGAAGGAAGAGTCATTGCCTGTTAAACTTGGTCTTGGGGTTGGTGCTGCTGCTCACTCTGCTGCAATAAACCATCCTCTGATCGCAAGcgagaataataataagtcTTTGTTTACGGAAGCTCAGAAGCGTGAACTTCAACATCAAGCTTTCGTCTTCAAGTACATAGCAAATGGTCTTCCTGTTCCCCTGCATCTTGTGCTTCCCATTTTGAAGAGTGTTACTGATACCTTTGCATCTGACTTGGACGGGTTCTACAAGCAGTACCCAAGCTTTGTGAGATTCCATCACATGGGTTTTGATTATGGGAAAGTAGTGGATCCTGAACCATATAGGTGTAGAAGAACCGATGGAAAGAAATGGAGGTGCAGTAAGAACGTAGTGCCTGATCAGAAGTATTGTGAAAGCCACATGCATAGAGGTCGTAACCGTTCAAGAAAGCCTGTGGAAACATCTGAAGCCAGCTCTTCTTCTGTAATAACAAAGCTACCAGCCAAGTTACATGCCAAGCAAGGGTCAAACACAGAATTTGAAGTTGCAAACCCTTTGGGCACTCAACTCAGTGATACATCTACTTCATCCAGCGGCTTCTGTAGAGTTAACACTTGGTCTACAAGTAGATGCAAGTTAATATGTTCTGCTGACACCCAAACCTCCTTACCTCGTGCTACTGTGGCATCCCCCAGCTCCAGTCCTGGCACTGCTGGTAATGCAACGGCAACCACCATCAGCAGAACAACAACGTCTATCACttccaaaagcaaaagcaatcTAATTAACTACAAAACAGATGACAAAGCCGAGAGCAGTTTGAGCTACAATGGCATCAGCGTTAAAAGCAATGGGAAAGGAAACATCAACAATGATACTAATAACATCTGTACCAGAATAGGCTTCTCCCCAAGGAGTGTTCTTCAAGGAATTATTGTTTCTGGTTGCAATCACTCGTGTCTCAACGACAGAAACAGCACAGAACTTGAACCAGGAAGGTGTCGGAGAACAGATGGTAAAAAGTGGCGGTGCAGGAGTGCTGTTCTTCCTAATCAGAAGTATTGTGCTACGCATATGCACAGAGGTGCTAAGAAGCGTTTTGCAGACTCTGAACCAGCTCCTAGTTCAGCTGGCACCGTTACTATTGCACGGTTGCCTCCTTCTACAGCCTCAAACTACATTCAGAAAGCATATTGTACAATCCCGAATACAAATCTTTCCATGTCAATCCCAGCAAGTGCACCATTGGTACAACGCAACGAGAGAAGTCATAGCAGCAGTGACACTGATACCACTATTACTGACACCATTAATGAGAATAGCTATGTCTCTTATTA 1382 0.4342 MKMDWEGKMEDIDGKTGLMKEESLPVKLGLGVGAAAHSAAINHPLIASENNNKSLFTEAQKRELQHQAFVFKYIANGLPVPLHLVLPILKSVTDTFASDLDGFYKQYPSFVRFHHMGFDYGKVVDPEPYRCRRTDGKKWRCSKNVVPDQKYCESHMHRGRNRSRKPVETSEASSSSVITKLPAKLHAKQGSNTEFEVANPLGTQLSDTSTSSSGFCRVNTWSTSRCKLICSADTQTSLPRATVASPSSSPGTAGNATATTISRTTTSITSKSKSNLINYKTDDKAESSLSYNGISVKSNGKGNINNDTNNICTRIGFSPRSVLQGIIVSGCNHSCLNDRNSTELEPGRCRRTDGKKWRCRSAVLPNQKYCATHMHRGAKKRFADSEPAPSSAGTVTIARLPPSTASNYIQKAYCTIPNTNLSMSIPASAPLVQRNERSHSSSDTDTTITDTINENSYVSY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01762 460 Pfam QLQ 56 88 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva02g01762 460 PANTHER - 20 266 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva02g01762 460 ProSiteProfiles WRC domain profile. 125 169 IPR014977 -
Bva02g01762 460 PANTHER GROWTH-REGULATING FACTOR 9 333 410 - -
Bva02g01762 460 ProSiteProfiles WRC domain profile. 343 388 IPR014977 -
Bva02g01762 460 MobiDBLite consensus disorder prediction 153 176 - -
Bva02g01762 460 ProSiteProfiles QLQ domain profile. 55 90 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva02g01762 460 PANTHER GROWTH-REGULATING FACTOR 9 20 266 - -
Bva02g01762 460 SMART QLQ_2 54 90 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva02g01762 460 PANTHER - 333 410 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva02g01762 460 Pfam WRC 345 381 IPR014977 -
Bva02g01762 460 Pfam WRC 126 168 IPR014977 -
Bva02g01762 460 MobiDBLite consensus disorder prediction 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01762 Bva-Chr2 19883113 19886157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01762 340 454 GRF Transcription Factor Family AT2G45480 31.757 2.02e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva02g01762 WRC 7.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01762 - - gmx:100795050 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01762 02 19883113 19886157 Bva02g01762 02 19883113 19886157 ECH