Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01744 aTGGATCCAGTGGCTGCACAAGGTCGCCCTCTTCCACCTCCTTTTCTTAGTAGAGATCTTCATCTTCACCCTCACCACCAATTCCAATCCCATCACAACAACCTAAACTCAGAAGACGAGCAGCAGAGTGGTAATGGCAGCTTGACCCGCGGCCAGAAACGAGATCGAGATGATAATCAAAACGCCACTAACACCAACGCAGGGGACGGCAAGGAATTAGGTTCTAGCACCAACACCGGAGGAGGGGAGATCGGTAGAAGACCTCGAGGTAGACCAGCTGGGTCAAAGAACAAGCCAAAGCCACCCATCATCATCACTAGGGACAGCGCCAACGCTCTCCGATCCCACGTCATGGAAATCGCCAACGGCTATGATATCATGGAGGGTGTCACAAACTTCGCGCGGCGGAGGCAACGTGGGGTTTGCATTTTGAGTGGGAGTGGCACTGTCACCAATGTCACTCTACGGCAGCCAGCTTCCCCCGGTGCAGTTGTCACCTTACATGGAAGATTCGAGATTCTCTCCTTGTCCGGTTCCTTTCTGCCGCCACCGGCGCCACCTGCGGCATCCGGATTGGCGATATATTTGGCCGGTGGTCAAGGTCAGGTGGTTGGCGGCAGCGTGGTGGGGCCCTTGTTGGCGTCGGGTCCGGTAGTAATTATGGCGGCTTCATTTGGTAATGCGGCGTACGAGAGGCTGCCgttggaggaggaggagacGCCGGTGGCGGTGCCGGGGAGTGGCGGCTTAGGGTCACCGGGTACTGTAAGTGGacaacaacagcagcagcaacaacaacTAATGCCAGATCCTAACAGTTCACTATTTCATGGAGTGCCTCAAAATCTTATGAACCAATTACCGGCTGAGGGCTATTGGGGTGGAAGTGCTCGCCCTCCTTTTTA 905 0.5249 MDPVAAQGRPLPPPFLSRDLHLHPHHQFQSHHNNLNSEDEQQSGNGSLTRGQKRDRDDNQNATNTNAGDGKELGSSTNTGGGEIGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGYDIMEGVTNFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEEEETPVAVPGSGGLGSPGTVSGQQQQQQQQLMPDPNSSLFHGVPQNLMNQLPAEGYWGGSARPPF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01744 301 Gene3D - 113 242 - -
Bva02g01744 301 MobiDBLite consensus disorder prediction 1 20 - -
Bva02g01744 301 ProSiteProfiles PPC domain profile profile. 110 246 IPR005175 -
Bva02g01744 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 226 IPR005175 -
Bva02g01744 301 CDD DUF296 114 181 IPR005175 -
Bva02g01744 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 301 IPR014476 GO:0003680
Bva02g01744 301 PIRSF ESCAROLA 18 299 IPR014476 GO:0003680
Bva02g01744 301 MobiDBLite consensus disorder prediction 29 49 - -
Bva02g01744 301 MobiDBLite consensus disorder prediction 61 82 - -
Bva02g01744 301 MobiDBLite consensus disorder prediction 25 105 - -
Bva02g01744 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 246 - -
Bva02g01744 301 MobiDBLite consensus disorder prediction 238 280 - -
Bva02g01744 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 301 - -
Bva02g01744 301 MobiDBLite consensus disorder prediction 252 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01744 Bva-Chr2 19764882 19765787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01744 1 301 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 62.733 2.30e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01744 - - jre:108980480 413.305