Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01742 ATGAGTTTAAACTCTAGTAGTAGTGGAAGTGGCGGTGGTGGCGGCGGAAGCAGTAGTGGAGGAGCTGGTGGCggtggcggcggcggcggcccatgTGGCGCGTGCAAGTTCTTGAGGAGGAAATGTGTGCCGGGGTGTATTTTCGCTCCTTATTTCGATTCCGAGCAAGGAGCGACGCATTTTGCGGCGGTGCACAAGGTTTTCGGAGCAAGCAATGTGTCCAAACTGCTCTTAAATATTCCGGTACACAAGAGGCTTGATGCGGTGGTCACCATTTGTTATGAGGCACAAGCGCGGCTAAGAGATCCCGTGTACGGCTGTGTTGCCCACATTTTTGCCCTTCAGCAAcaggTGGTGAGTTTACAAGCAGAACTCTCCTATTTACAAGGCCACCTTGCCACATTAGAGCAACCCCATCCACCACCGCCACCTCCACCGCAGCAGGCGGCAATGGTACCACCAGCACTCTCTATCGCCGACCTCCCATCCGCCCCTACCTCCTCCGTTCCGGTTACATGCGACCTATCCTCACTTTTTGATCCCATGGCCCAAGCTTCATGGGTCATGCAGCCGCGGTCCATGGACCCGCGCCAGTACGTAGCCGGCGGCCCATCAGCGACGGTTAGTGCTGGTGATCTCTATGCATTGGCCCGTGAGCTCCTCCAAAGACATGGGTCTCCATCAGGAGCTGTTGTGCCATGCACTAATGTCTCTTCATCTCCCTCACTTTCCAAATG 737 0.5278 MSLNSSSSGSGGGGGGSSSGGAGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLEQPHPPPPPPPQQAAMVPPALSIADLPSAPTSSVPVTCDLSSLFDPMAQASWVMQPRSMDPRQYVAGGPSATVSAGDLYALARELLQRHGSPSGAVVPCTNVSSSPSLSK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01742 245 MobiDBLite consensus disorder prediction 229 245 - -
Bva02g01742 245 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
Bva02g01742 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 226 - -
Bva02g01742 245 MobiDBLite consensus disorder prediction 1 15 - -
Bva02g01742 245 Pfam Lateral organ boundaries (LOB) domain 31 129 IPR004883 -
Bva02g01742 245 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 226 - -
Bva02g01742 245 MobiDBLite consensus disorder prediction 1 22 - -
Bva02g01742 245 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01742 Bva-Chr2 19732477 19736285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01742 31 227 AS2 family AT2G45420 64.623 1.55e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva02g01742 LOB 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01742 K21994 - qsu:112017957 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00801 01 5688977 5692303 Bva02g01742 02 19732477 19736285 BWGD