Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01704 ATGTTTTTGCTAATCCTCCTGCTTAAAGTTCTAGTCTTTCTTGTTTGTGGTTCTCCTTCACTTTCTGCTTCGACTGAGCTTGACACTCTCATGGCCATTAAAGAATCACTTGACCCAGAAAACCGCTTGTTGACTTCGTGGACTCCCAGCTCCGATCTGTGTGGTGCTTTTGAAGGCGTGGCTTGCAATGAGCAAGGTCGTGTTGTGAATATTTCATTGCAGGGAAAGGGTCTCTCTGGGCAATTACCTGCAGCTTTGGCTGGGCTCAAGAGCTTGACGGGTCTGTACCTGCACTTCAATTCTCTGAACGGGAAAATACCAAAGGAGATTATGAGTTTGACTGAGCTAAGTGATTTGTACCTGAACGTGAACAATTTCTCTGGGGATATCCCTCGTGAGATTGGCAATATGTCTAATCTTCAGGTTTTGCAGCTTTGCTACAACAAATTTTCTGGGTTTATACCAACTGAACTTGGAAACTTGAGGAGGCTCAGTGTTCTTGCTCTGCAATACAATCAATTTACTGGCACAATTCCTGCAAGTTTGGGTGAATTGGAGAAATTAACACGGTTAGATCTGagctttaataaaatttttggtcCTGTTCCAGTGACATTAGCTAATGCACCTAAGCTGGAGATTCTTAACCTTCAAAACAATTCTCTCTCAGGCAATGTTCCAGCAGCTCTAAAACGACTGAAAAGTGGGTTCCAATACTACAACAACCTTGCTTTATGTGGTATTGGATTTGCCAATTTAGATTCATGTAAAGCTGCAAGTAGTCTAGATCCAAATAAACCTGAGCCTTTTGGACCTAGTGACCTTTCCACTAAAGACCTTCCAGCTTTAGCTCATCCAATAGCTCAAAACAGCAACGAGGAAACTAGTAAAGAGccatcaaaatcttcaaaagtGGGTTTGGTTTTTGGGGTGATTGGAGTTATTGTTGCTTTCAGTGTTTCTGGAGTTTTTGTGTTCTTATGGTACCGTCGtcagaaacagaaaattgGAAGTACAATGGACACTTCCGACGGTCGGCTTAGTACCGACCAGATCAAGGAAGTTTACAGGAAAAATGCATCCCCTCTGATCAATTTGGAGTATTCTAATGGATGGGATCCATTAGCCAAAGGCCGAAGTGGTTATTCTCAGGAAGTTCTTGAGGGTTTCATGTTCAATCTAGAAGAAGTGGACCGTGCAACTCAGTGCTTCTCAGAGGTAAATTTGTTGGGGAAGAGTAATTTCTCAGCTATCTACAGGGGAATCCTGAGAGATGGATCGGTTGTCGCCATCAAATGCATTGCGAAGACAAGCTGCAAGTCTGATGAAACTGCATTCTTGAAAGGGTTGAAGATATTGACCTCATTAAAGCATGAAAATCTAGTTCGATTGAGAGGCTTTTGCTGTTCTAAAGGGAGGGGTGAATGTTTTCTCATCTATGATTTTGTCCCAAATGGCAGTTTGTTACAGTATCTTGATGTTAAGAATGGTAATGGCAAGGTTCTGGAATGGTCCACCAGAGTATCCATCATCAATGGCATTGCTAAAGGTATTGCTTATCTTCACGGAAAGAAAGGAACCAAACACGCCCTAGTTCACCAGAATATATCCGCTGAAAAAGTGCTTCTCGATGCCCGGTATAATGCCTTACTTTCAGATTCAGGACTGCACAAGCTACTTGCAGATGATGTTGTCTTCTCCACCCTCAAAGCTAGTGCTGCCATGGGATATCTGGCTCCAGAGTACACAACGACTGGGCGCCTGACTGAAAAGAgtgatatatatgcatttggGGTGATAGTTTTCCAGCTTCTTACTGGAAAACGTGACATCACTCACTTAAGTCGCAGCGGGGCAGAGGCGTCTGGTTTCAGAGATTTGGTTGATGTGAACCTTGAAGGGAAGTTCTCTGAACCAGAGGCAGCCAAACTGGAGAGAATTGCCCTGCTTTGCACCCATGAATCTCCTTATCGCAGACCAGCTATGGACTATGTAATACAAGAattgattgaaaataatagCAGTTCATG 2030 0.4167 MFLLILLLKVLVFLVCGSPSLSASTELDTLMAIKESLDPENRLLTSWTPSSDLCGAFEGVACNEQGRVVNISLQGKGLSGQLPAALAGLKSLTGLYLHFNSLNGKIPKEIMSLTELSDLYLNVNNFSGDIPREIGNMSNLQVLQLCYNKFSGFIPTELGNLRRLSVLALQYNQFTGTIPASLGELEKLTRLDLSFNKIFGPVPVTLANAPKLEILNLQNNSLSGNVPAALKRLKSGFQYYNNLALCGIGFANLDSCKAASSLDPNKPEPFGPSDLSTKDLPALAHPIAQNSNEETSKEPSKSSKVGLVFGVIGVIVAFSVSGVFVFLWYRRQKQKIGSTMDTSDGRLSTDQIKEVYRKNASPLINLEYSNGWDPLAKGRSGYSQEVLEGFMFNLEEVDRATQCFSEVNLLGKSNFSAIYRGILRDGSVVAIKCIAKTSCKSDETAFLKGLKILTSLKHENLVRLRGFCCSKGRGECFLIYDFVPNGSLLQYLDVKNGNGKVLEWSTRVSIINGIAKGIAYLHGKKGTKHALVHQNISAEKVLLDARYNALLSDSGLHKLLADDVVFSTLKASAAMGYLAPEYTTTGRLTEKSDIYAFGVIVFQLLTGKRDITHLSRSGAEASGFRDLVDVNLEGKFSEPEAAKLERIALLCTHESPYRRPAMDYVIQELIENNSSS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01704 676 Pfam Protein tyrosine and serine/threonine kinase 408 669 IPR001245 GO:0004672|GO:0006468
Bva02g01704 676 SUPERFAMILY L domain-like 25 234 - -
Bva02g01704 676 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 671 - -
Bva02g01704 676 Gene3D Transferase(Phosphotransferase) domain 1 483 676 - -
Bva02g01704 676 CDD TM_EGFR-like 310 336 - -
Bva02g01704 676 SMART serkin_6 404 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01704 676 Gene3D Ribonuclease Inhibitor 177 245 IPR032675 -
Bva02g01704 676 Gene3D Phosphorylase Kinase; domain 1 380 482 - -
Bva02g01704 676 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Bva02g01704 676 Pfam Leucine Rich Repeat 211 233 IPR001611 GO:0005515
Bva02g01704 676 Gene3D Ribonuclease Inhibitor 23 176 IPR032675 -
Bva02g01704 676 SUPERFAMILY Protein kinase-like (PK-like) 385 670 IPR011009 -
Bva02g01704 676 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 671 - -
Bva02g01704 676 ProSiteProfiles Protein kinase domain profile. 404 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01704 676 CDD STKc_IRAK 410 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01704 Bva-Chr2 19475566 19478440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01704 1 517 Miscellaneous Gene Families AT4G22730 50.936 3.50e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bva02g01704 PK_Tyr_Ser-Thr 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01704 - - qsu:111997683 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01704 02 19475566 19478440 Bva02g01704 02 19475566 19478440 ECH