Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01688 ATGAAAACCACTTCTGCCGCCACCATCTTGCTCTTCTTTCTGGCCATGGCAGCCGCCATCACCGGCCTCGACGAAATGGAGATCCTTCAGATAGCCCAAAGCCAGGTTATCCAAGCCAGATATTGGGCAGAAACCTCCGTGAGCTTTAAAGACTCAATCAAATGTCATGATGCAGTTAACGGAGATGCGGCTCTTAGAGACTGTGGCAAGCTTTATGGTGAGAGCCAGTTCCGGCTCTCGCAGATGTTGTCCAAGGAGAGTACTTATACCAGAGATGATGCACACACTTGGCTGAGTGCTGTAATGATAAACCATAGAACATGTATGGATGAGttgaaggaaaaggaataTCATGTAGATCATGATGTAGAAAGAAACTTAACTACTTTGCTAGACATGGCCATTGCCTTGAGTAGGAGCAAGGGTAATGAGAAGAGATCGCAACCACTGGAAGAAGGGTCAGACGGAGGAGGGCTTCTAGGATCATGGAACGCAGCAGGGTCCAAGGTAGACTTCACGGTGGCACAGGATGGTTCCGGCAGCCACAAAACAATCAAAGAGGCACTTGATGCTTTGGCTGCAATGGATCATAAACGTCCATCTCGAGCagttatttatgtaaaatcaGGAGTATATAGTGAAAAAGTGCAGATTTTACAAGCAATGAATAATGTGATGCTCGTTGGTGATGGCATAGACAAAACCATTGTTACTGGTGAAAGAGATGTAGCTAGTGCTGGTTCCCTTTTATCTTCATCTACAGTGGATGTATCTGGGGATGGTTTTTGGGCAAGAGACATTACATTTGAAAACACAGCAGGCCCTTCTAAGCACCAAGCAGTAGCCCTAAAAGTCAGCTCAGACAAATCTGTCTTCTACAAATGCAGCTTCAAAGGCTACCAAGACACTCTCTACGTCCATTCCAACAGACAATTCTACCGCCAATGTCAAATCTACGGCACCGTCGATTTCATATTCGGGGACGCCGCTGCAGTTTTCCAAGATTGTGACATATTCGTAAGAAAACCAATGCCGGGTCAGTTCAATTCCATCACTGCACAGGGAAGAGACAGAGCAGATGAACCCACTGGCATTGTTATTCATGGGAGCCGTGTGAGGCCTGATTCTGATCTTTCTGCAGATTTGGGTTCATTCAAGACCTACTTGGGCAGGCCATGGAAGCAATATTCTAAAACTGTGTTCATGAAAACGGACTTGGATGAGCTCATTGAGCCAAAAGGGTGGAGGGAATGGGATGGAAGCTATGCACTTTCAACGTTGTTCTATGGAGAGTACATGAACACTGGAAGTGGTGCATCGACTGATAATAGGGTTAGTTGGCCTGGTTTTCATGTGCTTGGAGAAGATGAAGCTAGGGCTTTTACGGTAGGTCGTTTTATGGATGGAGATTCATGGATTCCTACAACTGGAGTACCTTATTGGGGTGGAATTTA 1454 0.4505 MKTTSAATILLFFLAMAAAITGLDEMEILQIAQSQVIQARYWAETSVSFKDSIKCHDAVNGDAALRDCGKLYGESQFRLSQMLSKESTYTRDDAHTWLSAVMINHRTCMDELKEKEYHVDHDVERNLTTLLDMAIALSRSKGNEKRSQPLEEGSDGGGLLGSWNAAGSKVDFTVAQDGSGSHKTIKEALDALAAMDHKRPSRAVIYVKSGVYSEKVQILQAMNNVMLVGDGIDKTIVTGERDVASAGSLLSSSTVDVSGDGFWARDITFENTAGPSKHQAVALKVSSDKSVFYKCSFKGYQDTLYVHSNRQFYRQCQIYGTVDFIFGDAAAVFQDCDIFVRKPMPGQFNSITAQGRDRADEPTGIVIHGSRVRPDSDLSADLGSFKTYLGRPWKQYSKTVFMKTDLDELIEPKGWREWDGSYALSTLFYGEYMNTGSGASTDNRVSWPGFHVLGEDEARAFTVGRFMDGDSWIPTTGVPYWGGI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01688 484 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 7 482 - -
Bva02g01688 484 CDD PMEI-like_4 56 137 - -
Bva02g01688 484 Pfam Pectinesterase 171 470 IPR000070 GO:0030599|GO:0042545
Bva02g01688 484 SMART PMEI_2 2 137 IPR006501 GO:0004857
Bva02g01688 484 ProSitePatterns Pectinesterase signature 2. 318 327 IPR033131 -
Bva02g01688 484 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 140 IPR035513 -
Bva02g01688 484 PANTHER PECTINESTERASE 7 482 - -
Bva02g01688 484 Gene3D - 166 484 IPR012334 -
Bva02g01688 484 SUPERFAMILY Pectin lyase-like 167 483 IPR011050 -
Bva02g01688 484 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 137 IPR035513 -
Bva02g01688 484 Pfam Plant invertase/pectin methylesterase inhibitor 50 137 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01688 Bva-Chr2 19401256 19403630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01688 1 484 Carbohydrate Esterase AT3G60730 51.923 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01688 K01051 - gmx:100792852 572.392