Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01686 ATGGCATTTCGCTTACTCATAACCCTTCTAATTgttcctttcttgttttcatctTCTGTTTCTGGATATTCCTATAATGAGGTTAAGAATTGGTGCAGCCAAACCCCTAACCCTCAACCATGTGAGTATTTCTTGGGTAATAAGCCAGCTCGTGAAAGCAAACTCATCAAACACAAGTCTGATTTCCTCAAGCTTTCGCTCCAACTTGCTCAAGAGCGAGCACTGAAGGGCCATGAAAACACGCTTAGACTTGGCCCAAAGTGCAGGAACCCAAGAGAAAAGGCTGCATGGTCTGATTGCCTTGAGCTTTATGCGCAGACCATCAAAAAACTCAACCAAACCTTGGATTCCAACACAAAGTGCTCCCAAACAGATGCTCAAACATGGCTCAGCACAGCTCTCACCAACCTTGACACTTGCAAAGCTGGGTTCTATGAACTTGGGGTTCAAGACTATGTGTTGCCTTTGATGTCCAATAATGTGACCAAGTTACTAAGCAACACGTTGGCTCTTAACAAGGTTCCATATCAAGAACCAAGTTACAAAAATGGGTTCCCAACGTGGGTGAGACCCGGTGACCGGAAGCTACTGCAGACATCTTCTCCAGCTTCTAAGGCTAATGTGGTAGTGGCTAAAGACGGATCAGGAAAGTACACAACGCTGAATGCTGCCATAAGTGCTGCACCAAAGAGTAGCGGTGGGAGATATGTGATATACGTGAAGGCAGGGGTATACAACGAGCAAGTTGAGATAAAGGCCAAAAATATCATGTTGGTTGGAGATGGTATTGGGAAGACTATTATCACCGGTAGCAAAAGTGTTGGAGGGGGCACCACAACCTTCCGTTCAGCCACTGTTGcTGCTGTTGGAGATGGGTTTATTGCTCGAGACATCACATTTAGGAATACAGCTGGTGCATCAAACCATCAAGCCGTGGCATTTCGTTCTGGCTCAGACCTATCAGTATATTACAGATGCAGCTTTGAAGCCCAAGGCCGTACTGATCCAAATCAGAACACTGGAATTTCCATTCATAACTCTAAGGTCACAGCTGCCTCCGATCTAAAACCAGTTCAGAGCTCTGTCAAGACCTATCTTGGGAGGCCTTGGAAGGAATATTCTCGAACAGTGTTCATGAAGAATTATCTTGATAGTTTGGTAAATTCTGCTGGCTGGTTGGAATGGAGTGGCAACTTTGCATTGAACACTTTGTATTATGGGGAGTACATGAACACGGGTCCGGGTTCATCCACTGCCAATCGGGTCAAATGGTCCGGTTACCGTGTTATCAAAAGTGCATCTGAAGCCTCGAAATTCACTGTTGGAAACTTCATTGCCGGTAACTCATGGTTGCCATCAACCGGCGTGCCTTTTACTTCTGGTCTGTG 1388 0.4503 MAFRLLITLLIVPFLFSSSVSGYSYNEVKNWCSQTPNPQPCEYFLGNKPARESKLIKHKSDFLKLSLQLAQERALKGHENTLRLGPKCRNPREKAAWSDCLELYAQTIKKLNQTLDSNTKCSQTDAQTWLSTALTNLDTCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVPYQEPSYKNGFPTWVRPGDRKLLQTSSPASKANVVVAKDGSGKYTTLNAAISAAPKSSGGRYVIYVKAGVYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAAVGDGFIARDITFRNTAGASNHQAVAFRSGSDLSVYYRCSFEAQGRTDPNQNTGISIHNSKVTAASDLKPVQSSVKTYLGRPWKEYSRTVFMKNYLDSLVNSAGWLEWSGNFALNTLYYGEYMNTGPGSSTANRVKWSGYRVIKSASEASKFTVGNFIAGNSWLPSTGVPFTSGL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01686 462 PANTHER PECTINESTERASE 330 461 - -
Bva02g01686 462 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
Bva02g01686 462 PANTHER PECTINESTERASE 4 330 - -
Bva02g01686 462 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Bva02g01686 462 PANTHER PECTINESTERASE 4 330 - -
Bva02g01686 462 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 174 IPR035513 -
Bva02g01686 462 SUPERFAMILY Pectin lyase-like 201 461 IPR011050 -
Bva02g01686 462 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 174 IPR006501 GO:0004857
Bva02g01686 462 Pfam Pectinesterase 330 448 IPR000070 GO:0030599|GO:0042545
Bva02g01686 462 CDD PMEI-like_3 31 173 - -
Bva02g01686 462 Gene3D - 202 330 IPR012334 -
Bva02g01686 462 Gene3D - 331 462 IPR012334 -
Bva02g01686 462 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 174 IPR035513 -
Bva02g01686 462 PANTHER PECTINESTERASE 330 461 - -
Bva02g01686 462 SMART PMEI_2 23 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01686 Bva-Chr2 19391579 19393395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01686 1 462 Carbohydrate Esterase AT2G45220 61.702 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01686 K01051 - gmx:100783428 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01686 02 19391579 19393395 Bva02g01686 02 19391579 19393395 ECH