Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01685 ATGGCGTTTCGTTTAGCCATAACACTTCTGATTGTTCCATTACTATTTGCATCTCTTGTCTCTGGCTATTCTTATAATGAGGTTAAGAATTGGTGCAGCCAAACTCCTAACCCTCAACCATGTGAGTATTTCTTGGGTAATAATCCTGCTCGTGAAAGCAAACTCATCAAACACAAGTCTGATTTCCTCAAGCTTTCACTCCAACTCGCTCAAGAGCGAGCACTGAACGGCCATGAAAATACCCTTCTACTTGGCCCTAAGTGCAGGAACCCGAGAGAAAAGGCTGCTTGGTCTGATTGCCTTGAGCTTTATGAGCAGACCATCCAAAAACTCAACAAAACCTTGGATCCCAACACAAAGTGCTCCCAAACAGATGCTCAAACGTGGCTCAGCACAGCTTTGACAAACCTTGAGACCTGCTATGCTGGGTTCTACGAACTTGGGGTTCAAGACTATGTCCTGCCTTTGATGTCCAACAATGTCACCAAGTTGCTAAGCAACACTTTGTCACTTAACAAGGTTTCATATCAAGAGCCAAGTTACAAAAATGGGTTCCCAACTTGGGTGAAGCCCGGCGATAGGAAGCTGTTGCAAACATCATCTGCTGCTTCTCAGGCTAATATTGTGGTGGCTAAGGACGGATCGGGCAAGTACACAACAGTTAATGCTGCCATAAGTGCTGCACCAAAGAGTAGCAGTGGGAGGTATGTGATATACGTGAAGACAGGGGTATACAACGAGCAAGTTGAGATAAAGGCCAAGAATATCATGTTGGTTGGAGATGGTATTGGGAAGACTATTATCACCGGTAGCAAAAGTGTTGGAGGGGGGACCACAACGTTCCGTTCAGCCACCGTTGCTGCTGTTGGAGATGGGTTCATTGCTCGAGACATCACATTTAGAAACACTGCTGGTGCATCAAACCATCAAGCCGTGGCATTTCGTTCTGGCTCAGACTTATCAGTATTTTACAGGTGCAGCTTTGAAGGTTACCAAGACACACTGTACGTGCACTCTGAAAGACAATTCTACAGGGAGTGTAACATCTATGGCACTGTTGATTTCATCTTTGGCAATGCTGCTGTGGTTTTCCAAAACTGCAACATCTTTGCCAGAAATCCTCCTAACAAAGTGAACACAATCACTGCTCAAGGCCGGACCGACCCAAATCAAAACACTGGAATTTCCATTCACAACTCTAAGGTCACAGCTGCCTCCGATCTAAAACCAGTTCAGAGCTCTGTCAAGACCTATCTTGGGAGGCCTTGGAAGCAATACTCGCGAACAGTGTTCATGAAGACTTATCTTGATAGCTTGGTCAATTCTGCTGGTTGGTTGGAATGGAGTGGTAACTTTGCATTGAACACTTTGTATTATGGGGAGTACATGAACACGGGTCCGGGTTCATCCACTTCCAATCGGGTCAAATGGTCCGGTTACCATGTTATCACAAGTGCATCTGAAGCCTCGAAATTCACTGTTGGGAACTTCATTGCCGGAAACTCTTGGTTGCCATCCACTAGTGTGGCTTTCACCTCTGGTCTTTA 1547 0.4557 MAFRLAITLLIVPLLFASLVSGYSYNEVKNWCSQTPNPQPCEYFLGNNPARESKLIKHKSDFLKLSLQLAQERALNGHENTLLLGPKCRNPREKAAWSDCLELYEQTIQKLNKTLDPNTKCSQTDAQTWLSTALTNLETCYAGFYELGVQDYVLPLMSNNVTKLLSNTLSLNKVSYQEPSYKNGFPTWVKPGDRKLLQTSSAASQANIVVAKDGSGKYTTVNAAISAAPKSSSGRYVIYVKTGVYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAAVGDGFIARDITFRNTAGASNHQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNSKVTAASDLKPVQSSVKTYLGRPWKQYSRTVFMKTYLDSLVNSAGWLEWSGNFALNTLYYGEYMNTGPGSSTSNRVKWSGYHVITSASEASKFTVGNFIAGNSWLPSTSVAFTSGL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01685 515 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 173 IPR006501 GO:0004857
Bva02g01685 515 PANTHER PECTINESTERASE 4 514 - -
Bva02g01685 515 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Bva02g01685 515 Gene3D - 201 515 IPR012334 -
Bva02g01685 515 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
Bva02g01685 515 PANTHER PECTINESTERASE 4 514 - -
Bva02g01685 515 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 174 IPR035513 -
Bva02g01685 515 Pfam Pectinesterase 207 501 IPR000070 GO:0030599|GO:0042545
Bva02g01685 515 CDD PMEI-like_3 31 173 - -
Bva02g01685 515 SUPERFAMILY Pectin lyase-like 201 514 IPR011050 -
Bva02g01685 515 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Bva02g01685 515 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 174 IPR035513 -
Bva02g01685 515 SMART PMEI_2 23 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01685 Bva-Chr2 19386967 19388821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01685 1 515 Carbohydrate Esterase AT2G45220 70.406 0.0 747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01685 02 19386967 19388821 Bva02g01685 02 19386967 19388821 ECH