Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01684 ATGGCATTTCGCTTGCTCTTGACACTTTTCTCCCTTCACTTCCTGTTTTCCTCTTTCGCTTCTTGTTATACTGTCAATGAGGTTAAGGATTGGTGCAGCCAAACTCCTAAATCCTCAACCATGAACCCAAGAGAAAAGGCTGCTTGGTCTGATTGCCTTGAGCTTTATGAGCAGACCATCCAAAAACTCAACAAAACCGTGGATCCCAACACAAAGTGCTCCCAAACAGATGCTCAAACATGGCTCAGCACAGCTCTCACCAACCTTGAGACTTGTAAAGCTGGGTTCTATGAACTTGGGGTTTCAGACAATGTGTTGCCTTTGATGTCCAACAATATCACCAAGTTACTAAGTAATACGTTGTCTCTTAACAAGGTTCCATATCAAGAACCAAGTTACAAAAATGGGTTCCCAACTTGGGTCAGACCTGGTGACCGGAAGCTACTGCAGACATCTTCTCCAGCTTCTAAGGCTAATGTTGTGGTGGCTAAAGACGGTTCCGGCAAGTACACTACTGTAAATGCTGCCATAAGTGCAGCACCGAAGAGTAGCAGTGGGAGATATGTGATATATGTGAAGGCTGGAGTATACGATGAACAAGTTGAGATAAAGTCAAACAATATAATGTTGGTGGGAGATGGTATTGGAAAGACTGTTATCACCGGTAGCAAAAGTGTCGGTGGGGGCACCACAACCTTCCGTTCTGCCACTGTTGCTGTTGTTGGGGATGGCTTTATTGCACAAGACATGACATTTAGGAACACTGCTGGAGCAGCAAATCACCAAGCCGTGGCACTGCGTTCTGGATCAGACTTATCAGTGTTTTATAGATGCAGCTTCGAAGGTTACCAAGACACACTATATGTTCACTCTGAGAGACAATTCTACAGAGAATGTGACATCTACGGCACAGTCGACTTCATCTTTTGTAATGCCGCTGTAGTTTTCCAAAATTGCAACCTCTATGCAAGAAATCCTCCTAATAAAGTTAACACAATCACCGCCCAAGGTCGAACTGACCCAAACCAGAACACCGGCATTTCCATTCATAACTTTAGGGTTACAGCTGCCTCAGATCTTAAACCAGTTCAGAGCTCTGTTAAGACCTATCTTGGGAGACCATGGCAACAGTATTCACAAACAGTTTTTATGAAGACTTATCTTGACAGTTTGATTAACCCGGCTGGCTGGCTCGAATGGAGTGGTAACTTTGCTTTGAGTACGTTATATTATGGAGAGTACATGAACACTGGTCCAGGTTCTTCCACTGCAAATCGTGTCAAATGGTCAGGTTATCATGTCATCTCAAGTGCAACTGAAGCTTCAAAATTCACCGTTGGAAATTTCATTGCAGGTAATTCCTGGTTGCCGTCCACAAGCGTGCCTTTCACCTCTACTCTCTG 1403 0.4419 MAFRLLLTLFSLHFLFSSFASCYTVNEVKDWCSQTPKSSTMNPREKAAWSDCLELYEQTIQKLNKTVDPNTKCSQTDAQTWLSTALTNLETCKAGFYELGVSDNVLPLMSNNITKLLSNTLSLNKVPYQEPSYKNGFPTWVRPGDRKLLQTSSPASKANVVVAKDGSGKYTTVNAAISAAPKSSSGRYVIYVKAGVYDEQVEIKSNNIMLVGDGIGKTVITGSKSVGGGTTTFRSATVAVVGDGFIAQDMTFRNTAGAANHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFCNAAVVFQNCNLYARNPPNKVNTITAQGRTDPNQNTGISIHNFRVTAASDLKPVQSSVKTYLGRPWQQYSQTVFMKTYLDSLINPAGWLEWSGNFALSTLYYGEYMNTGPGSSTANRVKWSGYHVISSATEASKFTVGNFIAGNSWLPSTSVPFTSTL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01684 467 PANTHER PECTINESTERASE 41 466 - -
Bva02g01684 467 ProSitePatterns Pectinesterase signature 1. 184 203 IPR018040 -
Bva02g01684 467 CDD PMEI-like_3 37 125 - -
Bva02g01684 467 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 126 IPR035513 -
Bva02g01684 467 PANTHER PECTINESTERASE 41 466 - -
Bva02g01684 467 Gene3D - 154 467 IPR012334 -
Bva02g01684 467 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Bva02g01684 467 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 126 IPR006501 GO:0004857
Bva02g01684 467 Pfam Pectinesterase 159 453 IPR000070 GO:0030599|GO:0042545
Bva02g01684 467 Pfam Plant invertase/pectin methylesterase inhibitor 37 123 IPR006501 GO:0004857
Bva02g01684 467 SUPERFAMILY Pectin lyase-like 153 466 IPR011050 -
Bva02g01684 467 SMART PMEI_2 23 123 IPR006501 GO:0004857
Bva02g01684 467 Gene3D Invertase/pectin methylesterase inhibitor family protein 17 126 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01684 Bva-Chr2 19382461 19384298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01684 1 467 Carbohydrate Esterase AT2G45220 63.883 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01684 K01051 - gmx:100783428 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01684 02 19382461 19384298 Bva02g01684 02 19382461 19384298 ECH