Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01683 ATGGCAGCGTTCTACtttctcataaaatttctcttctttgtcATCTTGTTTTCCCCTTTTGTTTCTGGTTATTCTCCAAATGAGGTTAAGGAATGGTGCAACCAAACCCCGAACCCTCAATCATGTGAGTATTACTTGAGCATTAACCCCACCCTCAAAGACAAACCCATTAGAAACAAGACTGATTTCCTCAAGCTTTCACTTCAACTTGCTCAAGAGCAAGCACTGAATGGCCATGCACACACTCTTATACTTGGCTCAAAGTGCAGAAATCCACGAGAAAAGGCGGCATGGGCTGATTGCCTTGAGCTTTATGAGCATACCGTCAGAAAACTCAACAAAACAATAGATCCCAACACTAAGTGTTCCCAAGCTGATGCTCAAACATGGCTCAGCACAGCTCTCACCAACCTAGAGACTTGTAAAGCTGGGTTCTTTGAACTTGGGTTTCGGGACTATGAATTGCCCCTGCTGTCCAACAATGTCACTAAGTTGCTCAGCAATATTTTGGCCCTTAATAAGGTTCCATATCAAGAATCAAGTTACAAAAATGGGTTCCCAACTTGGGTGAAACCCGGTGACCGGAAGCTATTGCAGACATCTTCTCCAGCGTCTCAAGCTAATGTTGTGGTGGCTAAGGACGGATCAGGCAAGTACACAACATTGAATGCTGCCATAGGTGCTGCTCCGGCGAGTAGCAGTGGAAGATATGTGATATATGTGAAGGCAGGAACATATGATGAACAAGTTGAGATAAAGGGAGATAATATTATGTTGATAGGAGATGGCATTGGGAAGACTGTAATTACCGGTAGCCGAAGTGTTGGAGGTGGTTCCACAACCTTCAGTTCTGCCACTGTCGCTGTTGATGGCGATGGGTTTATTGCTAGAGACATTACTTTCATAAACACAGCTGGGGCAGCAAGCCTCCAGGCCGTGGCACTACGTTCTGGGTCAGATCTATCAGTATTTTACAGATGTAGCTTTGACGGTTATCAAGACACACTATGTGTGTTCTCTAATAGGCAATTTTATAGGGAATGTGATGTTTATGGCACAGTTGACTTCATCTTTGGAAACGCTGCTGTGGTTTTCCAAAACTGTAACCTTTATGCTAGAAATCCTCCAAACAAAGTCAACACCATCACTGCCCAAGGTCGAACAGATCCAAACCAGAATACAGGAATTTCCATTCACAATTCTACGGTTACAGCTGCCTCGGATCTGAAAGCAGTTCAGGGCTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCTATAACCGTTTTCATGAAGAGTTACCTTGACAGTTTGATTGATCTTGCTGGTTGGACAGAATGGAATGGTGATTTTGCCTTAAGTACTTTGTATTATGGAGAATACATGAACACTGGTCCAGGTTCATCAACAGAAAATCGTGTTAAATGGACAGGTTACCATGTCATCACCAGTGGCACTGAAGCATCCAGATTCACTGTGGAGAACTTCATTGCTGGGAACTCATGGTTGCCATCAACCAGTGTGCCCTTCACGTCAGGACTGTA 1550 0.4335 MAAFYFLIKFLFFVILFSPFVSGYSPNEVKEWCNQTPNPQSCEYYLSINPTLKDKPIRNKTDFLKLSLQLAQEQALNGHAHTLILGSKCRNPREKAAWADCLELYEHTVRKLNKTIDPNTKCSQADAQTWLSTALTNLETCKAGFFELGFRDYELPLLSNNVTKLLSNILALNKVPYQESSYKNGFPTWVKPGDRKLLQTSSPASQANVVVAKDGSGKYTTLNAAIGAAPASSSGRYVIYVKAGTYDEQVEIKGDNIMLIGDGIGKTVITGSRSVGGGSTTFSSATVAVDGDGFIARDITFINTAGAASLQAVALRSGSDLSVFYRCSFDGYQDTLCVFSNRQFYRECDVYGTVDFIFGNAAVVFQNCNLYARNPPNKVNTITAQGRTDPNQNTGISIHNSTVTAASDLKAVQGSVKTYLGRPWQQYSITVFMKSYLDSLIDLAGWTEWNGDFALSTLYYGEYMNTGPGSSTENRVKWTGYHVITSGTEASRFTVENFIAGNSWLPSTSVPFTSGL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01683 516 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Bva02g01683 516 PANTHER PECTINESTERASE 4 515 - -
Bva02g01683 516 SMART PMEI_2 24 172 IPR006501 GO:0004857
Bva02g01683 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 175 IPR035513 -
Bva02g01683 516 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Bva02g01683 516 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Bva02g01683 516 CDD PMEI-like_3 32 174 - -
Bva02g01683 516 PANTHER PECTINESTERASE 4 515 - -
Bva02g01683 516 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Bva02g01683 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 175 IPR035513 -
Bva02g01683 516 Pfam Pectinesterase 208 502 IPR000070 GO:0030599|GO:0042545
Bva02g01683 516 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Bva02g01683 516 Gene3D - 203 516 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01683 Bva-Chr2 19376738 19378576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01683 1 516 Carbohydrate Esterase AT2G45220 65.184 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01683 K01051 - gmx:100781697 814.683