Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01682 ATGGCGGCGATTCGATCTCTCATAGCCCTTCTAATCATTCCCTTTCTATTTTCGTCTCCTGTTTCTAGTAAACCTTGGGTTGATGACGTTAAACAATGGTGCAGCCAAACTCCATACCCTCAACCATGTGAGTACTTCTTGAGCCACAAACCTGCTTCAAAAATCACATGCAAAGCTGATTTTCTCAAGCTTTCCCTGGAACTTGCCCTAGAGAGAGCACTAAATGGCCAACAAAATACTCGTTCACTTGGCCCTAAATGCAGAAACACACGTGAAAAGGCTGCATGGGAGGATTGCCTTGAGCTCTACGAGAACACGATCAACAAGCTCAACAAAACCGTAGAACCGAAGTGCTCTCAAACTGATGCTCAAACATGGCTCAGCACAGCCCTAACCAACCTTGTAACATGCGTGGTCGGGTTTTATGAGCTTGGTGTTCCGGACTACTTGGTACCATTGTTGTCGAACAATGTTACCATGTTGCTAAGCAATACTTTGTCTCTTAACAATGGCCCAGCCACACCTCCAAGTTCTAAAGATGGGTTCCCGACGTGGGTCAAGCCCGGTGACCGGAAGTTGTTGCAGACGGCTTCCCCGGCTGCTCAGGCTAATGTGGTGGTGGCTAAAGATGGCTCCGGCAAGTACGCTACTGTAAGTGCCGCGGTAAATGCTGCCCCAAAGAGTGGTGGGAGGTATGTGATATATGTGAAGGCTGGGGTTTACAATGAAAATGTTCAGATAAAAGGGAGTAATATCATGTTGGTGGGAGATGGCATTGGAAGAACTATTATCACAGGTAGCAGAAGTGTTGGAGGGGGTAGCACAACCTTCAATTCAGCCACTGTCGCTGCTACTGGAGATGGATTTATTGCTCGAGACATAACAATTAGAAACACTGCTGGACCAACAAACCATCAAGCCGTGGCATTGCGTTCCGGTTCAGATCTTTCAGTATTTTACAGATGCAGCTTTGAGGGCTATCAAGATACACTATATGTTTATTCCAATAGGCAGTTCTACAGAGAATGTGACATATACGGCACCGTTGACTTTGTTTTTGGCAATGCTGCTGCCGTTTTGCAAAACTGCAACCTTTATGCAAGAAACCCTCCTCAGAGAACCATCACATATACTGCTCAAGGCAGAACTGATCCAAACCAGAACACTGGAATCGTCATTCACAATTCACGGATCACAGGTGCCTCGGATTTTAAATCGAGTGGCGTTAAAGTGTACCTCGGGAGGCCATGGCAGAAATACTCAAGAACAGTTATCATGAAGACTTCCATTGATGGTTTCCTTAATCCTGCTGGTTGGATGGAATGGAGTGGCACTTTTGCCCTTGATACTTTATTCTATGCAGAATACCTAAATACTGGACCGGGTTCATCTACAGCGAACCGGGTCAACTGGAAGGGTTACCATGTTATTACTTCTGCATCTGAGGCCTCAGGATTTACCGTTGGGAGCTTCATTGCAGGAAATTCTTGGATACCAGCCACTGGTGTGCCTTTCACCGCTGGTCTCTA 1529 0.4624 MAAIRSLIALLIIPFLFSSPVSSKPWVDDVKQWCSQTPYPQPCEYFLSHKPASKITCKADFLKLSLELALERALNGQQNTRSLGPKCRNTREKAAWEDCLELYENTINKLNKTVEPKCSQTDAQTWLSTALTNLVTCVVGFYELGVPDYLVPLLSNNVTMLLSNTLSLNNGPATPPSSKDGFPTWVKPGDRKLLQTASPAAQANVVVAKDGSGKYATVSAAVNAAPKSGGRYVIYVKAGVYNENVQIKGSNIMLVGDGIGRTIITGSRSVGGGSTTFNSATVAATGDGFIARDITIRNTAGPTNHQAVALRSGSDLSVFYRCSFEGYQDTLYVYSNRQFYRECDIYGTVDFVFGNAAAVLQNCNLYARNPPQRTITYTAQGRTDPNQNTGIVIHNSRITGASDFKSSGVKVYLGRPWQKYSRTVIMKTSIDGFLNPAGWMEWSGTFALDTLFYAEYLNTGPGSSTANRVNWKGYHVITSASEASGFTVGSFIAGNSWIPATGVPFTAGL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01682 509 Coils Coil 93 113 - -
Bva02g01682 509 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 171 IPR035513 -
Bva02g01682 509 ProSitePatterns Pectinesterase signature 1. 228 247 IPR018040 -
Bva02g01682 509 PANTHER PECTINESTERASE 7 508 - -
Bva02g01682 509 Pfam Pectinesterase 204 495 IPR000070 GO:0030599|GO:0042545
Bva02g01682 509 Pfam Plant invertase/pectin methylesterase inhibitor 29 168 IPR006501 GO:0004857
Bva02g01682 509 ProSitePatterns Pectinesterase signature 2. 345 354 IPR033131 -
Bva02g01682 509 SMART PMEI_2 25 168 IPR006501 GO:0004857
Bva02g01682 509 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 170 IPR035513 -
Bva02g01682 509 PANTHER PECTINESTERASE 7 508 - -
Bva02g01682 509 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 170 IPR006501 GO:0004857
Bva02g01682 509 Gene3D - 198 509 IPR012334 -
Bva02g01682 509 SUPERFAMILY Pectin lyase-like 198 508 IPR011050 -
Bva02g01682 509 SMART complete 236 412 IPR006633 -
Bva02g01682 509 CDD PMEI-like_3 33 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01682 Bva-Chr2 19363560 19366505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01682 1 509 Carbohydrate Esterase AT2G45220 64.603 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01682 K01051 - gmx:100794948 774.622