Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01671 atGTCCGCCTCATCCACTTCCTTTTCACCGGACCAGCACCTCTCTCCTTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAATTTCTGTGACACTGTCCTCGCTGTAAGTGTTCCTTGTACCAGTTTGTTCAAGACTGTCACAGTGAGATGCGGCCATTGCACCAATCTTCTGTCTGTGAACATGCGTGGGCTGCTTCTTCCAACTGCCAATCAGCTTCACCTTGGACATACTTTCTTCACTCCTCAAAATCTTCTGGAGGAGATTCGAAATGCACCATCATCAAATATGCTCTTGAATCAACTGCCAAAGCCGAATGATCATTCAGTTATGCCACTGCGAGGAGGACCTGAGGATTTCCCTAAACCTCCACCTGCTAATAAACCTCCGGAGAAGAGACAGAGAGTTCCATCCGCTTACAACCGCTTCATCAAAGACGAGATCCAGCGCATCAAAGCTGGGAATCCAGATATAAGCCACAGAGAGGCCTTCAGTGCTGCTGCAAAGAATTGGGCCCATTTCCCTCACATCCACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCCAATGTGCGCCAGGAAGGAGAGGACATGCTTATGAAAGATGGCTTCTTCCCACAAGCAAATGTAGGTGTTTCTCCCTATTA 653 0.4855 MSASSTSFSPDQHLSPSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPTANQLHLGHTFFTPQNLLEEIRNAPSSNMLLNQLPKPNDHSVMPLRGGPEDFPKPPPANKPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDMLMKDGFFPQANVGVSPY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01671 217 Gene3D High mobility group box domain 122 177 IPR036910 -
Bva02g01671 217 PANTHER PROTEIN YABBY 6-RELATED 1 215 IPR006780 GO:0007275
Bva02g01671 217 Pfam YABBY protein 18 181 IPR006780 GO:0007275
Bva02g01671 217 SUPERFAMILY HMG-box 125 175 IPR036910 -
Bva02g01671 217 MobiDBLite consensus disorder prediction 97 136 - -
Bva02g01671 217 PANTHER PROTEIN YABBY 4 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01671 Bva-Chr2 19309566 19312475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01671 29 215 C2C2-YABBY Transcription Factor Family AT4G00180 62.679 1.49e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva02g01671 YABBY 2.6e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01671 K25796 - gmx:100781267 390.578