Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01637 ATGGCTTTGATTGTGGATCAACAACAAAACTTCAAGCATTTCtgtaaaatttgcaaaaaagGTTTTGTGTGTGGGAGAGCTCTTGGAGGGCATATGAGGGCACATGGCATCGGCGATGAAAGTGGCCATATGGACGACGATGATCCGAGTGATTGGGAAGACAAGCTAGGAGGGAATGTGGCTCCCAGCAACAAACGCATGTATGCATTAAGAACAAACCCTAACAGGCTAAAGAGCTGTAGGGTATGTGAGAATTGTGGTAAAGAGTTCTTATCTTGGAAATCTTTTCTAGAACATGGAAAGTGCACTTCTGAAGATGCTGAATCCCTGGTCTCATCTCCCTGCTCCGATGGCGAAGATGACATGGCCGGTGGCCGGAGAGGTTGTGGTGGTTGgtccaaaaggaaaagatcaTTTAGAACCAAAGTTGGTAACTTCAATCCTAATTGTCCATCAAGTGAGGAAGAAGACCTTGCCAATTGTTTGATGATGTTGTCCAATGCCAACGTCGATCCTCTCATGGCGGAGCCAGAGGAGTCTTGTGCCTCAGCTAGCAAAGATGAGGAGAGAAGAAACCCCATGAATTTCATTGCACCAATGTCTTATAGGGTTCCAGTAGATAACAAAGCCAAAGGGGTTGCCAAAGGTTTGTTCGAATGTAAAGCATGTAAGAAAGTCTTCAATTCCCACCAAGCATTGGGTGGCCACAGAGCTAGCCACAAGAAGGTAAAGGGTTGCTTCGCCGCCCGGCTTGAACAAATCGACGATAGCCTCGCCGACGATGACGTCATCACACATGAAGAATTTGTCCctataaaatcaaacaacGCCCTCCAATTTGATCATGGTATTAGCAATAATGCCACATTGGCTTCCTCTTCAAAGAGGAAATCCAAAGTCCACGAATGCTCCATATGTCACCGGATTTTCTCGTCAGGACAAGCATTGGGAGGACACAAGAGATGCCATTGGATCACATCAAATGCACCTGACACTTCCACATTGGCTAGATTTCAGCCATTAATCCAAGATCACATGGAGCAAAACATGAATCAAAGACCAAAGTTTGATAACTCAGAACCACTTGATCTCAAACTCGATCTCAACCTCCCAGCTCCGGCAGATGACCTAGCCGGATCCCGGAGGGACGTGGCGACAGAGATTCACTTACAGTCATGGGTAGGAATAAAGAACAAAGATACAAATACTAGAAGTCAATGTCACAGCCACCTCCAACGTCACAAAATCGACAATGACAATGTGGACgaggacaaaaataataacaactgCAATGCTTCATTGCAAAATGTTGTGGATGATGAAGCTGACAGTAAGGTCAAGTTTGCAAAACTAAGCGAACTAAAGGACATCAACATAGGTGGGACTTCCTCGCCATGGTTGCAGGTGGGAATTGGTTCAACAACAGATGTGGGAGCTGACCCATA 1445 0.4367 MALIVDQQQNFKHFCKICKKGFVCGRALGGHMRAHGIGDESGHMDDDDPSDWEDKLGGNVAPSNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSEDAESLVSSPCSDGEDDMAGGRRGCGGWSKRKRSFRTKVGNFNPNCPSSEEEDLANCLMMLSNANVDPLMAEPEESCASASKDEERRNPMNFIAPMSYRVPVDNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLEQIDDSLADDDVITHEEFVPIKSNNALQFDHGISNNATLASSSKRKSKVHECSICHRIFSSGQALGGHKRCHWITSNAPDTSTLARFQPLIQDHMEQNMNQRPKFDNSEPLDLKLDLNLPAPADDLAGSRRDVATEIHLQSWVGIKNKDTNTRSQCHSHLQRHKIDNDNVDEDKNNNNCNASLQNVVDDEADSKVKFAKLSELKDINIGGTSSPWLQVGIGSTTDVGADP 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01637 481 ProSiteProfiles Zinc finger C2H2 type domain profile. 218 245 IPR013087 -
Bva02g01637 481 SMART c2h2final6 218 240 IPR013087 -
Bva02g01637 481 SMART c2h2final6 13 35 IPR013087 -
Bva02g01637 481 SMART c2h2final6 301 323 IPR013087 -
Bva02g01637 481 ProSitePatterns Zinc finger C2H2 type domain signature. 303 323 IPR013087 -
Bva02g01637 481 ProSiteProfiles Zinc finger C2H2 type domain profile. 301 323 IPR013087 -
Bva02g01637 481 PANTHER OS02G0659100 PROTEIN 1 480 - -
Bva02g01637 481 SUPERFAMILY beta-beta-alpha zinc fingers 13 100 IPR036236 -
Bva02g01637 481 ProSitePatterns Zinc finger C2H2 type domain signature. 220 240 IPR013087 -
Bva02g01637 481 SUPERFAMILY beta-beta-alpha zinc fingers 217 323 IPR036236 -
Bva02g01637 481 Gene3D Classic Zinc Finger 10 102 - -
Bva02g01637 481 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Bva02g01637 481 Gene3D Classic Zinc Finger 216 323 - -
Bva02g01637 481 PANTHER OS02G0659100 PROTEIN 1 480 - -
Bva02g01637 481 Pfam C2H2-type zinc finger 300 325 - -
Bva02g01637 481 Pfam C2H2-type zinc finger 218 242 - -
Bva02g01637 481 Pfam C2H2-type zinc finger 13 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01637 Bva-Chr2 19094189 19096138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01637 96 350 C2H2 Transcription Factor Family AT1G02040 35.612 1.43e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva02g01637 zf-C2H2_6 2.7e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01637 - - rcu:8265845 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01637 02 19094189 19096138 Bva02g01637 02 19094189 19096138 ECH