Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva02g01606 | ATGGGGAGCATGTCTGAACCAGATAGAAAACGGCGTCACTTTAGCTCCTTGTCTCCTACTGCAGCAGCTGCTACTGCTAAGAAGCTACCCTTCTTGCCCGTATCTGAAGACAAAAAGCTTGATATTGCTGTGCTTCAGTTTCAGAATCAAAAGCTTACACAGAAATTAGAAACTCAGAAGGTGGAACATACTGCTCTTGAGAATAAATTTTCTCAACTGAAGGAGAAGCAACAGTCGTATGATTCCACATCAACATTGGCCAAGAAGTCTTGGGAACAGCTGGTCAATGATTTGGAGTTATGTTCTATTGGCACAAGAGAGTCTTGCAGCAAATTGGATTCCAAGTTTACATCAGTCACAGGAGGTTGTAGTCCATCTTCTGTTGAGGATGTTTTTCTTAGCCGACTTCTGCAAACTGGTGCAACTGAAAGTTCCTCAACATTTAATTGTGCTGATCAGATGGGAGACCATAGAGCAAGTACTACTGAAAAAGCTAAGagcattataaataatatagtgACAGCTATCAACAATCTTTGGTTTGTGAAGGATGGTTTGCATGCTACAGTACTAGAGAACCTTCCAGATGATGGTTCATGCAGGCAGGAATCCACCGTTGGTTTGCtgacaaaagttaaaaacttgAGATCTGCATTCAGTGAACTTCATTTGAAGCACAAATCCTTGATGAGTGAGTTTCAAAGTCATAGAGATCTTGATGACAAAAACAAAGTTGAgcttaaaagattaaaagGGGAATTGGAAAGCACTGTAGCAGAATTAGAAGAAAGCAATACTAAATTGGCAACCCTTAAGGCGGAGAGAGATGCGGCAAAAGGGGGAATTTTCCCAATCTTAAATGTTGGAAACAAGCATATTTCTAGTGATAAGATCGGAGACAAGCAAAAGGATTTGCAGGACTTGGAGTCTTCCCTGAAAGAGCTAATGGACCAGGGTATGTCTCGACTAGGAGAGCTGAAAAGACTTCATGaggaaagaataagaatattacAGCAGTTATGCGACTTACAGAACACtctgaagaatttgaaatgtatTGTCTCTTCTGAATCATTCAAATTGGTGAGAGATCAAATAGAGAAGTCAAAATCTGAAGTTCTCGAGTATCAGGCCTCATTTGAGAAACTACAGGTTGAGAAGGATATCCTTTCATGGAAGGAAAGGGATTTGTACATGAAAAGTGATATAGTAGATGTTGTTCAAAGATCTGCAGCAATTGTGGATTCTAGAGCAGCTGATTTAAGGATtaaaattcagaaaacaaTTGAGGAAAGAAATGACATTGAAAAGAGGTTGGAAGAGGCAGCAAGAGAACCAGGAAGGAAACAAGTCATTGCTGAATTTAAATCCCTGGTGTCTTCATTTCCTGAGGAAATGGGATCTATGCAAAGTCAGTTAAGCAAGTACAAAGAGGCAGCTTCGGATATCCATTCTCTGCGTGCAGATGTGCAGTCTCTTTCTACTATTCTTGATAGAAAGgTAAAAGAATGTGACATGTCTGCTGTCAGATCTGCTGATCAGGCTGCTGAGATACAGAGGCTGAATGCTATGGTCCAAGTTTTGAGAGAAAGTGAGGAAgagttgaaattaattttggaaatGTATAGACGCGAATCCATCGATTCAAGGGATGTTGCTGAAGCACGGGATTCAGAATACAGAGCATGGGCCCGTGTTCAAAGTTTGAAATGTTCCCTTGATGAGCACAATTTGGAACTTAGAGTTAAAACAGCAAATGAAGCAGAGGCTAGATCTCAACAGAGGCTGGCTGCTGCTGAAGCTGAGATAGCTGATCTGAGACAGAAATTAGAAGCTTCTAAAAGGGAGAAGTGTAAATTGTCTGATggtttaaaatcaaaaaatgaagaaaatgaggcCTATCTATCTGAAATAGAGaCTATTGGACAAGCATATGATGATATGCAAAATCAGAACCAACAATTGTTGCAGCAGATTACGGAGGGAGATGACTACAATATCAAGCTTGTCTTAGAGGGTGTTAGGGCGAGACAGAAGCAGGATTCCTTGCTCATGGAGAAGAAGGTCATAGAACGAGAGATCCAGCAACAAAATGcatctctaaatttttatgacATGAAAGCTGCAAGAGTTGAAGATCAGGTGAAATTCTGTTCAGATCAGATTCAGAGAATTGCGGAGGATAAGTTTAATAGTTCTGTCACTTTGGAAAATACACAAAAAAGGTTACTGGATGTGCGAAGGGCATCTGAACAAGCCAGAAAGACACTGGAAGAAGCACAATCTAGAGTTGGTAGTAGTCGAGTAACTCGTATGGAGTTACAAGTAGAAGTTGAGAAAGAAAGGTTTgctaagaaaagaatagaggaGCAGCTGGAGGTTGCCAGGAGAAAGGTTTCATCTCTTCGGGCAAAGACTGAGGGCTCCTCGGTTACTCAAAAGCTTCGTCAGGAACTGCGTGAATACAGGGAAATTATTAAGTGCAGTATCTGTCAGGACAGGACAAAAGAGGTGGTAATCACAAAATGCTACCATTTGTTTTGCTACCCTTGCATCCAGAAAGCAATGGAGAATAGGCACCGCAAGTGTCCACAGTGTTCTGCAAGCTTTGGGCCTAACGATGTTAAGCCTGTTTATCTGGTTCAGTG | 2648 | 0.3867 | MGSMSEPDRKRRHFSSLSPTAAAATAKKLPFLPVSEDKKLDIAVLQFQNQKLTQKLETQKVEHTALENKFSQLKEKQQSYDSTSTLAKKSWEQLVNDLELCSIGTRESCSKLDSKFTSVTGGCSPSSVEDVFLSRLLQTGATESSSTFNCADQMGDHRASTTEKAKSIINNIVTAINNLWFVKDGLHATVLENLPDDGSCRQESTVGLLTKVKNLRSAFSELHLKHKSLMSEFQSHRDLDDKNKVELKRLKGELESTVAELEESNTKLATLKAERDAAKGGIFPILNVGNKHISSDKIGDKQKDLQDLESSLKELMDQGMSRLGELKRLHEERIRILQQLCDLQNTLKNLKCIVSSESFKLVRDQIEKSKSEVLEYQASFEKLQVEKDILSWKERDLYMKSDIVDVVQRSAAIVDSRAADLRIKIQKTIEERNDIEKRLEEAAREPGRKQVIAEFKSLVSSFPEEMGSMQSQLSKYKEAASDIHSLRADVQSLSTILDRKVKECDMSAVRSADQAAEIQRLNAMVQVLRESEEELKLILEMYRRESIDSRDVAEARDSEYRAWARVQSLKCSLDEHNLELRVKTANEAEARSQQRLAAAEAEIADLRQKLEASKREKCKLSDGLKSKNEENEAYLSEIETIGQAYDDMQNQNQQLLQQITEGDDYNIKLVLEGVRARQKQDSLLMEKKVIEREIQQQNASLNFYDMKAARVEDQVKFCSDQIQRIAEDKFNSSVTLENTQKRLLDVRRASEQARKTLEEAQSRVGSSRVTRMELQVEVEKERFAKKRIEEQLEVARRKVSSLRAKTEGSSVTQKLRQELREYREIIKCSICQDRTKEVVITKCYHLFCYPCIQKAMENRHRKCPQCSASFGPNDVKPVYLVQ | 882 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva02g01606 | 882 | Coils | Coil | 736 | 763 | - | - | |
Bva02g01606 | 882 | ProSitePatterns | Zinc finger RING-type signature. | 843 | 852 | IPR017907 | - | |
Bva02g01606 | 882 | Coils | Coil | 771 | 805 | - | - | |
Bva02g01606 | 882 | Coils | Coil | 582 | 616 | - | - | |
Bva02g01606 | 882 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Bva02g01606 | 882 | ProSiteProfiles | Zinc finger RING-type profile. | 828 | 867 | IPR001841 | - | |
Bva02g01606 | 882 | Coils | Coil | 418 | 445 | - | - | |
Bva02g01606 | 882 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 809 | 881 | IPR013083 | - | |
Bva02g01606 | 882 | Coils | Coil | 525 | 545 | - | - | |
Bva02g01606 | 882 | PANTHER | RING FINGER PROTEIN-RELATED | 1 | 880 | IPR013956 | GO:0004842|GO:0010390 | |
Bva02g01606 | 882 | Coils | Coil | 42 | 76 | - | - | |
Bva02g01606 | 882 | Coils | Coil | 366 | 386 | - | - | |
Bva02g01606 | 882 | SMART | ring_2 | 828 | 866 | IPR001841 | - | |
Bva02g01606 | 882 | Coils | Coil | 298 | 318 | - | - | |
Bva02g01606 | 882 | CDD | RING-HC_BRE1_like | 826 | 867 | - | - | |
Bva02g01606 | 882 | Coils | Coil | 638 | 658 | - | - | |
Bva02g01606 | 882 | Coils | Coil | 244 | 274 | - | - | |
Bva02g01606 | 882 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 | 1 | 880 | - | - | |
Bva02g01606 | 882 | SUPERFAMILY | RING/U-box | 821 | 880 | - | - | |
Bva02g01606 | 882 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bva02g01606 | 882 | Pfam | Zinc finger, C3HC4 type (RING finger) | 827 | 866 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva02g01606 | Bva-Chr2 | 18845846 | 18855544 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva02g01606 | 825 | 879 | C3H Transcription Factor Family | AT3G58030 | 35.714 | 3.69e-08 | 55.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva02g01606 | K10696 | - | gmx:100790744 | 1244.95 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva02g01606 | 02 | 18845846 | 18855544 | Bva02g01606 | 02 | 18845846 | 18855544 | ECH |