Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01605 ATGGAAAGTGATGCTCAAGACAACTTCTCTGGCTCTTCCTCCTCCTTCACttcctccaccaccaccaccaccaccatcgCTGCTGCTGCCGCCGCCGCCaccacctcctcctcctcttccttctcttcATCAACTAGAGCAGCAATTTCTGCTACTTCAAACTCAAGTTCAGATACCAAGCAAGACTGTGAAAGTCCTCAAAACGGTTCAACCGGAGGTCAAGACATGGAAAATGGCAAAGAGTGCAAGAAAAGGCAGAGAAGTGATAATGATGGTAAGCATCCTACATATAGAGGTGTTAGAATGAGAAATTGGGGTAAATGGGTGTCAGAGATCcgggaaccaagaaagaaatcaagaatATGGCTTGGAACATATCCTTGTGCAGAAATGGCAGCTAGAGCCCATGATGTAGCTGCTTTAGCCATCAAGGGTCACTCAGCTTACCTCAATTTCCCCGAATTGGCTCAGGAGCTTCCCCGGCCGGCGAGCAAGTCTCCCAAGGACATCCAAGCTGCGGCTGCAAAGGCAGCAGCCATTGTATTTGAGGAGGGTAAGCATTGTCAAGCTGCAGCTGAAGCTGAAGCTGAACTGAGCCAGGCTGAGCAGGCTTCGTCTTCAACTGTCTCCTTGGACAATACTCAAGACTCTAATAGTTCTCCCTCTTCTAATGAAGATGACACATTGTTTGACCTACCAGATCTTTTCACCGATGGAAACAATGGACTTCTCTCATATTCTTCTTCATGGCATTTGTGTGCAGTTGACAGTGGTTTCCGGCTTGAGGAGCCATTTTTGTGGGAGAAGTACTA 812 0.4261 MESDAQDNFSGSSSSFTSSTTTTTTIAAAAAAATTSSSSSFSSSTRAAISATSNSSSDTKQDCESPQNGSTGGQDMENGKECKKRQRSDNDGKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPCAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPASKSPKDIQAAAAKAAAIVFEEGKHCQAAAEAEAELSQAEQASSSTVSLDNTQDSNSSPSSNEDDTLFDLPDLFTDGNNGLLSYSSSWHLCAVDSGFRLEEPFLWEKY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01605 270 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Bva02g01605 270 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Bva02g01605 270 MobiDBLite consensus disorder prediction 199 231 - -
Bva02g01605 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 270 - -
Bva02g01605 270 SUPERFAMILY DNA-binding domain 96 154 IPR016177 GO:0003677
Bva02g01605 270 MobiDBLite consensus disorder prediction 1 75 - -
Bva02g01605 270 PANTHER ETHYLENE RESPONSE FACTOR 26 270 - -
Bva02g01605 270 CDD AP2 97 155 IPR001471 GO:0003700|GO:0006355
Bva02g01605 270 SMART rav1_2 96 159 IPR001471 GO:0003700|GO:0006355
Bva02g01605 270 ProSiteProfiles AP2/ERF domain profile. 96 153 IPR001471 GO:0003700|GO:0006355
Bva02g01605 270 MobiDBLite consensus disorder prediction 1 100 - -
Bva02g01605 270 MobiDBLite consensus disorder prediction 199 227 - -
Bva02g01605 270 Pfam AP2 domain 95 146 IPR001471 GO:0003700|GO:0006355
Bva02g01605 270 MobiDBLite consensus disorder prediction 77 98 - -
Bva02g01605 270 Gene3D AP2/ERF domain 96 154 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01605 Bva-Chr2 18839883 18840890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01605 84 266 AP2-EREBP Transcription Factor Family AT2G44940 54.327 5.76e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g01605 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01605 - - gmx:100801129 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01605 02 18839883 18840890 Bva02g01605 02 18839883 18840890 ECH