Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01604 ATGTTTGGGCGTGCACCAAGGAAGAGTAATAACACCAAATACTATGATGTTCTTGGTGTTTCAAAAAATGCAAGTGAGGATGAACTCAAGAAAGCATATAAAAAGGCTGCaatgaagaatcatccagATAAAGGTGGAGATCCTGAGAAGTTCAAGGAGATATCTCAAGCATATGAAGTTCTCTGTGATCCTGAAAAGAGAGAACTGTATGACCAATATGGTGAAGATGCCCTTAAAGAGGGAATGGGGGGAGGAGGCGGCCCGTTTCATAATCCatttgatatatttgaatCATTCTTTGGTGGAGGGTCCTTCTCTGGTGGTGGTAGCTCACGAGGAAGAAGGCAGAGACATGGTGAAGATGTGGTGCATAGCTTGAAGGTTTCTTTGGAAGACCTCTACAATGGCACATCAAAGAAACTCTCTCTTTCTAGAAATATATTATGCCCGAAGTGTAAAGGGAAAGGTTCAAAGAGCGGAGCAGCTGGGAGATGTTTTGGTTGCCAAGGAACTGGTATGAAGATTACAACAAGACAGATTGGACTGGGCATGATTCAACAGATGCAGCATGTCTGTCCTGAATGCAAGGGAACTGGTGAGGTCATTAGTGAGAGAGATAGATGCCCTCAGTGCAAAGGAAATAAGGTCTCCCAGGAGAAGAAGGTGCTGCAGGTGAATGTCGATAAAGGGATGCAACAGGGTCAGAAGATCGTGTTTGAAGGACAAGCTGATGAAGCTCCTGACACAATCACTGGAGACATTGTTTTTGTCATACAAGTAAAGGAGCACCCCAAGTTCAAGAGGAAACAAGATGACCTCTTTGTTGAGCACAACCTCAGTTTAACTGAGGCTCTTTGCGGGTTCCAATTCGTCCTTACCCATCTTGATGGGAGACAACTATTGATAAAATCAAACCCTGGCGAAGTCATCAAGCCTGGTCAATATAAAGCCATAAATGATGAGGGAATGCCACAATACGGTAGGCCATTCATGAAGGGCCGGCTTTTCATCCAATTTAATGTTGATTTCCCAGATTCCGGGTTCCTTTCGCCGGACAAATGCCGGTTAATAGAAGCTGTCCTGCCCCAGAAGACGAGCAAGAACTTAACAGATATGGAGCTGGATGATTGTGAGGAGACCACCCTGCATGATGTCAATATTGATGAGGAGATGAGACGGAAGCAGCAACATCATTACCATGAGGCATATGATGAGGATGACGAGGAGCCATCTGGGCCTCGTGTGCAATGTGCTCAACAGTA 1262 0.4414 MFGRAPRKSNNTKYYDVLGVSKNASEDELKKAYKKAAMKNHPDKGGDPEKFKEISQAYEVLCDPEKRELYDQYGEDALKEGMGGGGGPFHNPFDIFESFFGGGSFSGGGSSRGRRQRHGEDVVHSLKVSLEDLYNGTSKKLSLSRNILCPKCKGKGSKSGAAGRCFGCQGTGMKITTRQIGLGMIQQMQHVCPECKGTGEVISERDRCPQCKGNKVSQEKKVLQVNVDKGMQQGQKIVFEGQADEAPDTITGDIVFVIQVKEHPKFKRKQDDLFVEHNLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPQYGRPFMKGRLFIQFNVDFPDSGFLSPDKCRLIEAVLPQKTSKNLTDMELDDCEETTLHDVNIDEEMRRKQQHHYHEAYDEDDEEPSGPRVQCAQQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01604 420 CDD DnaJ_C 120 346 - -
Bva02g01604 420 Gene3D DnaJ domain 10 110 IPR036869 -
Bva02g01604 420 CDD DnaJ_zf 149 215 IPR001305 GO:0031072|GO:0051082
Bva02g01604 420 PANTHER CHAPERONE PROTEIN DNAJ A6 7 420 - -
Bva02g01604 420 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 146 217 IPR036410 -
Bva02g01604 420 CDD DnaJ 14 63 IPR001623 -
Bva02g01604 420 SUPERFAMILY HSP40/DnaJ peptide-binding domain 115 273 IPR008971 GO:0006457|GO:0051082
Bva02g01604 420 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Bva02g01604 420 PRINTS DnaJ domain signature 15 33 IPR001623 -
Bva02g01604 420 PRINTS DnaJ domain signature 46 66 IPR001623 -
Bva02g01604 420 PRINTS DnaJ domain signature 66 85 IPR001623 -
Bva02g01604 420 Pfam DnaJ central domain 149 215 IPR001305 GO:0031072|GO:0051082
Bva02g01604 420 Hamap Chaperone protein DnaJ [dnaJ]. 10 377 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva02g01604 420 Gene3D - 264 345 - -
Bva02g01604 420 Gene3D - 149 215 - -
Bva02g01604 420 SUPERFAMILY Chaperone J-domain 9 109 IPR036869 -
Bva02g01604 420 MobiDBLite consensus disorder prediction 393 412 - -
Bva02g01604 420 ProSiteProfiles Zinc finger CR-type profile. 136 220 IPR001305 GO:0031072|GO:0051082
Bva02g01604 420 Gene3D - 111 263 - -
Bva02g01604 420 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 420 IPR044713 GO:0006457|GO:0030544
Bva02g01604 420 Pfam DnaJ domain 13 71 IPR001623 -
Bva02g01604 420 Pfam DnaJ C terminal domain 123 344 IPR002939 -
Bva02g01604 420 SMART dnaj_3 12 66 IPR001623 -
Bva02g01604 420 SUPERFAMILY HSP40/DnaJ peptide-binding domain 266 345 IPR008971 GO:0006457|GO:0051082
Bva02g01604 420 MobiDBLite consensus disorder prediction 393 420 - -
Bva02g01604 420 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01604 Bva-Chr2 18828102 18832203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01604 14 73 C2H2 Transcription Factor Family AT1G74250 42.029 7.35e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01604 K09503 - gmx:100800590 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01604 02 18828102 18832203 Bva02g01604 02 18828102 18832203 ECH