Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01583 ATGAGGGAGAAAGATGATGggttgggattgggattgggattgagTTTGAGCTTTGGTTCCTCTCCATTGAAGGATAATCTCATCATGCAGAAGCCTCCTCAATCTGTTTCCAATCAGAAGAGTTCATGGAATGATTTGTTTCAGTTACCTGATCGCAACTCCGACGCGAGGTCATTCCTTCGGGGAATAGACGTTAATTTAGCGCCGTCGACCACGGTGGTGGTGGATTGTGACGACAACAACGGTGTTACATTGCTGAACAGCACGGTGTCGAGTTTCAGCGGTAAACGGAGcgagagagaaggaaatggaGACGAACACGAAGCCGAGAGGGATTCATGCTCCCGAGGTAGCGAAGACGAGGAGGGCGGCGGCGATAACTCAAGGAAGAAGCTCAGGCTCTCAAGGCACCAAGCCATGATTCTGGAGGAGACCTTCAAGGAACACAGCACCCTCAATCCGAAGCAAAAACAAGCGTTGGCAAAGCAGCTGAATCTCAGGGCTCGACAGGTGGAGGTGTGGTTTCAGAACAGACGAGCAAGGACCAAATTGAAGCAAACTGAAGTGGACTGTGAATACTTGAAGAGATGCTGCGAGAATCTGACTGAGGAAAATAGGAGGCTGCAAAAGGAGGTGCAAGAGATTAGGGCATTGAAATTATCCCCACAGCTCTACATGAGCATGAACCCTCCTACCACTCTCACCATGTGCCCTTCATGCGAGCGTGTTGCCGTCTCTTCCaccacctcctcctcctcaGCCACCCCACCGGCCCCGCCTAACCACAACCCTAACATCCAGAGGCCAGTGCCTGTCAACCCTTGGGCAGCCATGTCTATCCAACACCGAGCATTCGACGGCCCTGCCCGCGATTGTTCGCTTTTAGTCAGGGCAATATGGTG 902 0.4834 MREKDDGLGLGLGLSLSFGSSPLKDNLIMQKPPQSVSNQKSSWNDLFQLPDRNSDARSFLRGIDVNLAPSTTVVVDCDDNNGVTLLNSTVSSFSGKRSEREGNGDEHEAERDSCSRGSEDEEGGGDNSRKKLRLSRHQAMILEETFKEHSTLNPKQKQALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQEIRALKLSPQLYMSMNPPTTLTMCPSCERVAVSSTTSSSSATPPAPPNHNPNIQRPVPVNPWAAMSIQHRAFDGPARDCSLLVRAIW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01583 300 Gene3D - 113 189 - -
Bva02g01583 300 PANTHER - 7 282 - -
Bva02g01583 300 Pfam Homeodomain 129 183 IPR001356 GO:0003677
Bva02g01583 300 Coils Coil 191 221 - -
Bva02g01583 300 MobiDBLite consensus disorder prediction 98 133 - -
Bva02g01583 300 CDD homeodomain 129 186 IPR001356 GO:0003677
Bva02g01583 300 ProSitePatterns 'Homeobox' domain signature. 160 183 IPR017970 GO:0000981|GO:0006355
Bva02g01583 300 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 7 282 - -
Bva02g01583 300 Pfam HD-ZIP protein N terminus 1 101 IPR006712 GO:0005634
Bva02g01583 300 MobiDBLite consensus disorder prediction 247 270 - -
Bva02g01583 300 SMART halz 185 228 IPR003106 GO:0006355|GO:0043565
Bva02g01583 300 SMART HOX_1 127 189 IPR001356 GO:0003677
Bva02g01583 300 SUPERFAMILY Homeodomain-like 118 186 IPR009057 -
Bva02g01583 300 MobiDBLite consensus disorder prediction 91 133 - -
Bva02g01583 300 ProSiteProfiles 'Homeobox' domain profile. 125 185 IPR001356 GO:0003677
Bva02g01583 300 Pfam Homeobox associated leucine zipper 185 218 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01583 Bva-Chr2 18680145 18682658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01583 33 287 Homeobox Transcription Factor Family AT3G60390 64.338 4.69e-103 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva02g01583 HD-ZIP_N 1.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01583 K09338 - pvy:116146403 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01583 02 18680145 18682658 Bva02g01583 02 18680145 18682658 ECH