Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01567 atggtAGAGAAATCATTTGCACTTGATGCTATTATAAAGGAAGCTGTTGATCTGGAGAACATTCCCCTTGGGGAAGTTTTTGATCATCTTAAATGTACAAGAGAAGGTTTATCCTCTGACCAAGTGCAAGACCGACTGGACCTCTTTGGTTATAACAAGCTTGAAGAGAAGAAGGAAAGtaaaattctgaaatttttggGCTTTATGTGGAATCCACTGTCATGGGTTATGGAAGCTGCTGCTCTCATTGCCATCTCTCTCACACATCACGGGGGAAAGAACCCGGATTATCAAGATTTTGCTGGCATAGTTATTTTGCTAATTATAAACTCTACCATCAGTTTCATAGAAGAAAACAACGCTGGAAATGCAGCTGCAGCTCTTATGGCCCGCTTGGCACCAAAAGCAAAGGTGCTTCGAGATGGAAAATGGAAGGAAGAAGATGCTGCAGTTTTGGTTCCTGGGGACATAGTCAGCATCAAGCTTGGTGACATCATTCCTGCTGACGCACGTCTCCTTGATGGAGATCCTTTAAAGATTGATCAGTCTGCTCTAACTGGAGAATCACTTCCAGTAACCAAGAATCCTGGAGACGGCGTATATTCTGGTTCGACTTGCAAGCAAGGAGAAATTGAAGCTGTAGTTATTGCAACTGGAGTTCACACTTTCTTTGGAAAGGCAGCTCATCTTGTGGAAAATACCACTCATGTTGGACATTTCCAAAAGGTTCTAACATCTATTGGAAATTTCTGTATCTGTTCCATTGCTGTTGGGATGGTTATTGAGATTATTGCTATATATGGGATCCAACATAGGCCTTATAGAGTTGGTATTGATAACCTTCTTGTGCTATTGATTGGTGGAATTCCTATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCAATTGGTTCACATCGGCTATCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAAATGGCTGGAATGGATGTGCTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTACAGTGGACAAGAATTTGATtgagGTTTTTGCTAAAGGTGTTGACAAGGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAAAACCAGGATGCCATTGATTGTGCAATTGTTTCCATGTTGGGAGACCCAAAGGAGGCACGATTCGGAATAAAAGAGCTTCACTTCCTTCCATTTAATCCAACTGATAAAAGAACAGCACTTACATACCTTGACAGTGCTGGTAAGATGCACAGAGTCAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACATAACAAAtcagaaatagaaaagaaagttcaTACAATCATTGACAAGTTTGCAGAACGTGGACTTCGGTCTCTAGCAGTTGCACGCCAGGAAGTGCCTGAGAGAAATAAAGACAGTCCAGGAGGCCCTTGGGAATTTGTTGGCCTTCTCCCTCTCTTCGACCCTCCTCGCCATGATAGTGCTGAAACAATCAGAAGAGCTCTGGATCTTGGGGTCAGTGTCAAAATGATCACTGGTGACCAACTTGCAATTGCTAAGGAAACTGGAAGACGTCTAGGGATGGGCACCAACATGTATCCATCATCATTTCTGCTTGGTGAAAGCAAAGAAGGACTAATTGCTCTTCCTGTTGATGAGCTCATTGAGAATGCTGATGGTTTTGCTGGTGTCTTTCCTGAGCATAAGTATGAGATTGTGAGAAGATTACAAGATAGAAAGCACATTTGTGGAATGACTGGTGATGGAGTGAATGATGCACCTGCCTTGAAGAAAGCAGACATAGGTATTGCTGTAGCAGATTCCACAGATGCTGCCAGAAGTGCTTCTGATATAGTTCTCACTGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACCAGCCGTGCAATATTCCAAAGAATGAAGAACTACACGaTATATGCTGTCTCGATCACTATTCGTATTGTGCTAGGTTTTATGTTACTGACCTGCTTTTGGGAATTTGACTTTCCTCCTTTCATGGTTCTGATCATTGCCGTTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCTTCTCCTCTTCCTGATAGTTGGAAACTTAGTGAAATTTTTGCAACTGGGATTGTCCTAGGCAGCTACCTGGCTCTAACAACAGTAATATTCTTCTGGGCAGCCTATGAAACTGACTTCTTCCCTAAAACATTTGGTGTGAGGAGCTTCAATAAAGACATTCTCAGCACTAACAATGAAACTGACTCCACTCGTTTGAACGGGATGCTGGGATCTGCTCTTTATCTTCAAGTCAGTACAATCAGTCAAGCCTTAATTTTTGTGACACGGTCCAGAGGGTGGTCTTACGCGGAAAGGCCTGGCCTTTTgcttgtttttgcttttattgttGCTCAACTgATTGCAACTATTATATCTGCAACTGCCAATTGGGAAATAGCTGAAATAAGAAGCATAGGTTGGGGCTGGACAGGAGTTATTTGGTTGTACAACATTCTAGTTTATATATTCCTAGATCCTATCAAATTTGCTGTTCGTTATGCATTAAGTGGAAGGGCATGGAATCGGGTGGTGAACCAAAAGACTGCATTTACCAACAAAAATGACTTTGGAAGAGAAGCACGAGAGGCTGCATGGGCTGCTGAGCAGAGAACACTGCACGGCCTTCAATCTGTTGAGACCAAGATGATTTCAGAGAAGCACACTTTCAGGGAGATGAATACATTGGCAGAAGAGGCTAAGAGGCGAGCCGAGCTCGCGAGGTTGAGGGAGCTTCACACTTTGAAAGGAAGAGTGGAGTCATTCGCCAAGCTAAGGGGTTTGGAAATTGATGCTCTCAATGGCCACTACACTGTGTA 2894 0.4195 MVEKSFALDAIIKEAVDLENIPLGEVFDHLKCTREGLSSDQVQDRLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAALIAISLTHHGGKNPDYQDFAGIVILLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWKEEDAAVLVPGDIVSIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAVGMVIEIIAIYGIQHRPYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDKDMVVLMAARASRLENQDAIDCAIVSMLGDPKEARFGIKELHFLPFNPTDKRTALTYLDSAGKMHRVSKGAPEQILNLAHNKSEIEKKVHTIIDKFAERGLRSLAVARQEVPERNKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSFLLGESKEGLIALPVDELIENADGFAGVFPEHKYEIVRRLQDRKHICGMTGDGVNDAPALKKADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWEFDFPPFMVLIIAVLNDGTIMTISKDRVKPSPLPDSWKLSEIFATGIVLGSYLALTTVIFFWAAYETDFFPKTFGVRSFNKDILSTNNETDSTRLNGMLGSALYLQVSTISQALIFVTRSRGWSYAERPGLLLVFAFIVAQLIATIISATANWEIAEIRSIGWGWTGVIWLYNILVYIFLDPIKFAVRYALSGRAWNRVVNQKTAFTNKNDFGREAREAAWAAEQRTLHGLQSVETKMISEKHTFREMNTLAEEAKRRAELARLRELHTLKGRVESFAKLRGLEIDALNGHYTV 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01567 964 PANTHER CALCIUM-TRANSPORTING ATPASE 5 944 - -
Bva02g01567 964 Gene3D - 343 490 IPR023299 GO:0000166
Bva02g01567 964 SFLD p-type atpase 313 640 IPR044492 -
Bva02g01567 964 Pfam E1-E2 ATPase 132 310 - -
Bva02g01567 964 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 819 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva02g01567 964 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 861 IPR023298 -
Bva02g01567 964 Pfam haloacid dehalogenase-like hydrolase 327 603 - -
Bva02g01567 964 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Bva02g01567 964 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Bva02g01567 964 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Bva02g01567 964 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Bva02g01567 964 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Bva02g01567 964 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Bva02g01567 964 SFLD Haloacid Dehalogenase 313 640 - -
Bva02g01567 964 Pfam Cation transporter/ATPase, N-terminus 20 84 IPR004014 -
Bva02g01567 964 Gene3D - 328 626 IPR023214 -
Bva02g01567 964 SUPERFAMILY HAD-like 327 636 IPR036412 -
Bva02g01567 964 Gene3D - 96 829 - -
Bva02g01567 964 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Bva02g01567 964 Gene3D - 134 218 - -
Bva02g01567 964 PRINTS H+-transporting ATPase (proton pump) signature 774 795 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g01567 964 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g01567 964 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g01567 964 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g01567 964 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g01567 964 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Bva02g01567 964 Gene3D - 913 964 - -
Bva02g01567 964 PANTHER PLASMA MEMBRANE ATPASE 5 944 - -
Bva02g01567 964 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Bva02g01567 964 CDD P-type_ATPase_H 36 855 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva02g01567 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 564 668 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g01567 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01567 Bva-Chr2 18577661 18584246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01567 1 964 Primary Pumps ATPases AT5G62670 79.171 0.0 1543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01567 K01535 - rcu:8265793 1617.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01567 02 18577661 18584246 Bva02g01567 02 18577661 18584246 ECH