Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01566 ATGACCCATTTTCAGTCCGATTTTGATGTTTTGGATTTGGAGTCAATCTCACGGTATCTTCTTGATGAAAAATCTGATGCGCTCATTGCATTTCCGGCAAGATTCGTCGGCAGCGGTGCTATGACCGAGAACGGCAGCCAAGCTTTGTCTCTTGACGGTGCCAGCTCTGCTGATATGTCTGGCGAGCTGACCACTGAGGCGCGTGGAGCTCACGCGCCACCGAGCGGGAGGAATTGTAGGGGGGTGAGGCGGCGGCCTTGGGGAATGTACGCGGCAGAGATAAGGGATCCGAGGAAGAACGGCACAAGGGTGTGGCTTGGGACTTATAAGACGGCTGAGGATGCGGCTTTGGCTTATGACCGAGCCGCTTTTGAGATCCGTGGCTCAAAAGCTAAGCTGAACTTTCCACATCTTATCGGGTCGAATAAATCAGAGCCCATTAGAGTGGGAGCAAAGCGCCGCTCTTCTCCTCAGATTAATTCGACGTCGTATAGCAATAGTTTAGAGGATACATTGCCTCAGGCGAAAAGGAGATA 536 0.5205 MTHFQSDFDVLDLESISRYLLDEKSDALIAFPARFVGSGAMTENGSQALSLDGASSADMSGELTTEARGAHAPPSGRNCRGVRRRPWGMYAAEIRDPRKNGTRVWLGTYKTAEDAALAYDRAAFEIRGSKAKLNFPHLIGSNKSEPIRVGAKRRSSPQINSTSYSNSLEDTLPQAKRR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01566 178 MobiDBLite consensus disorder prediction 154 171 - -
Bva02g01566 178 MobiDBLite consensus disorder prediction 140 178 - -
Bva02g01566 178 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Bva02g01566 178 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Bva02g01566 178 PANTHER DNA-BINDING DOMAIN 55 155 IPR044808 GO:0003700|GO:0009873
Bva02g01566 178 CDD AP2 80 138 IPR001471 GO:0003700|GO:0006355
Bva02g01566 178 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Bva02g01566 178 SMART rav1_2 78 142 IPR001471 GO:0003700|GO:0006355
Bva02g01566 178 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13-LIKE 55 155 - -
Bva02g01566 178 Pfam AP2 domain 80 128 IPR001471 GO:0003700|GO:0006355
Bva02g01566 178 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Bva02g01566 178 ProSiteProfiles AP2/ERF domain profile. 78 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01566 Bva-Chr2 18573592 18574649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01566 55 155 AP2-EREBP Transcription Factor Family AT2G44840 67.647 4.43e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g01566 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01566 K09286 - csin:114282448 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01566 02 18573592 18574649 Bva02g01566 02 18573592 18574649 ECH