Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01565 ATGATTCAGGAGACCATTCTTGAGCCATCCGATCTCGCTCTTCTTGAGTCAATTCAGCAGTTTCTCCTCAACGACGATTCCGATGTTCTCACCGCGTTTCCAGCTTGGGGCTGGAGCTCAAGCTCTGACCTAACCGATAACGGAAGTGAGTCGGAGTCAACCCGGAGTACCAACTCTGATGGTGTGGCACTCTACAATGCCTGCCCTAACGCCGTTGGCTCTCCATGTGTTTCATCAGAATGGACAACTACATCTTTTCAAGAGGTGTATGCGGTGGCGAGTGAATTTTACGCGCCTCCGTGTTGGACAGACTGTAATGGAAGCCCTTCGCTATCAAGCGTTTGTGACATCCAAGATATTACGTTCGACGGTTCCTGTTACAATGCCGTTGATACCACGTTAGTTTCCCAACAAACTAGGACGGATACTCCGGGGGTAGTTGCAGTGGCGCGTGAAAGCCACGCACAAGAAAGCTGGAGGCAATATAGGGGAGTGAGGCGTAGGCCATGGGGGAAGTACGCGGCTGAGATTAGGGACCCAAAGAAGAACGGCGCCAGGGTATGGCTTGGGACTTACGAGACGGCTGAGGAAGCGGCTTTGGCTTATGACCAAGCCGCTTTCAAGATGCGTGGCTCAAAAGCCAAGCTAAATTTTCCGCATCTCATCGGGTCCAATACGTCGGAACCGGTCAGAGTGACCGCAAAGCGCCGGTCGTCGGAGACTTATTCAACGTCAGAACTGGAACGGAAAAAGAGACGAGCTGGTTCTTTGGATACAGCCGAGTCGAGAGATCGATGCCAATA 803 0.5205 MIQETILEPSDLALLESIQQFLLNDDSDVLTAFPAWGWSSSSDLTDNGSESESTRSTNSDGVALYNACPNAVGSPCVSSEWTTTSFQEVYAVASEFYAPPCWTDCNGSPSLSSVCDIQDITFDGSCYNAVDTTLVSQQTRTDTPGVVAVARESHAQESWRQYRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEEAALAYDQAAFKMRGSKAKLNFPHLIGSNTSEPVRVTAKRRSSETYSTSELERKKRRAGSLDTAESRDRCQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01565 267 Pfam AP2 domain 161 211 IPR001471 GO:0003700|GO:0006355
Bva02g01565 267 MobiDBLite consensus disorder prediction 241 267 - -
Bva02g01565 267 Gene3D AP2/ERF domain 160 220 IPR036955 GO:0003700|GO:0006355
Bva02g01565 267 PRINTS Ethylene responsive element binding protein signature 162 173 IPR001471 GO:0003700|GO:0006355
Bva02g01565 267 PRINTS Ethylene responsive element binding protein signature 185 201 IPR001471 GO:0003700|GO:0006355
Bva02g01565 267 CDD AP2 161 221 IPR001471 GO:0003700|GO:0006355
Bva02g01565 267 PANTHER DNA-BINDING DOMAIN 139 243 IPR044808 GO:0003700|GO:0009873
Bva02g01565 267 SUPERFAMILY DNA-binding domain 161 220 IPR016177 GO:0003677
Bva02g01565 267 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 139 243 - -
Bva02g01565 267 MobiDBLite consensus disorder prediction 229 267 - -
Bva02g01565 267 SMART rav1_2 161 225 IPR001471 GO:0003700|GO:0006355
Bva02g01565 267 ProSiteProfiles AP2/ERF domain profile. 161 219 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01565 Bva-Chr2 18570554 18571566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01565 113 262 AP2-EREBP Transcription Factor Family AT2G44840 53.416 3.04e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g01565 AP2 4.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01565 K09286 - zju:107435141 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01565 02 18570554 18571566 Bva01g00654 01 4784401 4785075 BWGD
Bva02g01565 02 18570554 18571566 Bva02g01565 02 18570554 18571566 ECH