Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01563 ATGTTTGGACTCAACCAGCAGCTGGCTGCTGATTCCTCTGATCATTCAGCTGTTCTAGAAGCAATCAGGCAACACCTTCTTGGCGACGAAGTCGATGTCCAAACAACTTTTCCTGACAACAATGCTGCAATGTCTGGCCAGAGAGAGAACTGCGGCGAGGTGGCTACCAAACACGACATGACTCTGAACGACACCGTTTATGGCCATTCGGGTGGACTCCAGCTCATTTGGAATTTTCGTGATAATGCGATCAGAATGAGGGAGGAAGAAATGGTGGAGCCTGGCTCCAATGCGACGCCGTATCAGAGGCATTACATGGGTGTGAGGCGGCGCCCTTGGGGAAAATATGCGGCGGAGATAAGAGATCGAAAGAAGAATGGACCGGCTAGGATATGGCTTGGGACTTATGGCACAGCCGAGGAAGCCGCTCTGGCTTATGACCGAGCCGCTTATAGGATTCGCGGAGCCAAAGCCAAGCTGAATTTTCCTCACCTCATCGGCTCCAACCAGTGTGAGCCAATTCCAGTGGCTGGGAATGGCTGGGAAACAGTGAGTGACAATGGCATTCATCAACATTCTTCAAAGCCTAAGCGTAGAGCAACTCATGTTAACCATTTTGTATCAACTGGTTGGACCTA 638 0.5063 MFGLNQQLAADSSDHSAVLEAIRQHLLGDEVDVQTTFPDNNAAMSGQRENCGEVATKHDMTLNDTVYGHSGGLQLIWNFRDNAIRMREEEMVEPGSNATPYQRHYMGVRRRPWGKYAAEIRDRKKNGPARIWLGTYGTAEEAALAYDRAAYRIRGAKAKLNFPHLIGSNQCEPIPVAGNGWETVSDNGIHQHSSKPKRRATHVNHFVSTGWT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01563 212 MobiDBLite consensus disorder prediction 188 212 - -
Bva02g01563 212 ProSiteProfiles AP2/ERF domain profile. 104 163 IPR001471 GO:0003700|GO:0006355
Bva02g01563 212 PANTHER DNA-BINDING DOMAIN 65 182 IPR044808 GO:0003700|GO:0009873
Bva02g01563 212 SMART rav1_2 104 169 IPR001471 GO:0003700|GO:0006355
Bva02g01563 212 SUPERFAMILY DNA-binding domain 104 164 IPR016177 GO:0003677
Bva02g01563 212 Pfam AP2 domain 104 155 IPR001471 GO:0003700|GO:0006355
Bva02g01563 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 65 182 - -
Bva02g01563 212 CDD AP2 104 165 IPR001471 GO:0003700|GO:0006355
Bva02g01563 212 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Bva02g01563 212 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Bva02g01563 212 Gene3D AP2/ERF domain 103 164 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01563 Bva-Chr2 18549900 18550726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01563 89 204 AP2-EREBP Transcription Factor Family AT2G44840 52.800 1.05e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g01563 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01563 K09286 - fve:101293051 131.339