Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01539 ATGGAAGGGACAGAGAGAGGAGTTCCTCCCAATTACGAGCTTCAGGTTTCCTTCTCAGCCAACCCACAAGCCATCCACGAAATGGGTTTTGTACAATTTGAAGATCAAAACCAAGTTCTCAGCTTCTTGGCAGTGGCACCCTCACAACAATCTCAATCTTCTCAGTTATCTCAATCACTAAACGGAGGCACCGGCAGCTCCAACACCGTCACGGCCACCCCGGCGACGAACGCACTCGCCATGACCACCGGCGGGTTTAGCCATAACGACCTCGTGGCCAGAACTTCTTGGAATAACGAGCAGGTGGGAACTCTCGATCCTAAGGCTGTCAATGACGAAAATGGCACTGGAAATTCTAGTGATGGCAACAATACATGGTGGAGAAGTTCAGCCTCAGAGAAAAGCAAGGTGAAAGTAAGGAGGAAGTTGAGAGAGCCAAGGTTTTGCTTCCAAACTAGAAGCGATATAGATGTGCTTGATGATGGTTACAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTACTACCGATGCACTCATAGCAACTGTAGAGTGAAGAAGAGGGTTGAACGACTATCAGAGGATTGTCGTATGGTGATAACGACATATGAAGGTAGACACAACCACTCTCCTTGCGACGACTCAAATTCATCTGAACATGAAGGCTTCACCTCATTCTA 701 0.4679 MEGTERGVPPNYELQVSFSANPQAIHEMGFVQFEDQNQVLSFLAVAPSQQSQSSQLSQSLNGGTGSSNTVTATPATNALAMTTGGFSHNDLVARTSWNNEQVGTLDPKAVNDENGTGNSSDGNNTWWRSSASEKSKVKVRRKLREPRFCFQTRSDIDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEGFTSF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01539 233 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 16 230 - -
Bva02g01539 233 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g01539 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 230 IPR044810 GO:0003700
Bva02g01539 233 MobiDBLite consensus disorder prediction 104 132 - -
Bva02g01539 233 MobiDBLite consensus disorder prediction 214 233 - -
Bva02g01539 233 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01539 233 ProSiteProfiles WRKY domain profile. 154 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01539 233 MobiDBLite consensus disorder prediction 104 138 - -
Bva02g01539 233 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g01539 233 SUPERFAMILY WRKY DNA-binding domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01539 Bva-Chr2 18348607 18353915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01539 1 233 WRKY Transcription Factor Family AT2G44745 53.942 1.35e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva02g01539 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01539 - - qsu:111982898 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01539 02 18348607 18353915 Bva01g00621 01 4586791 4592933 BWGD
Bva02g01539 02 18348607 18353915 Bva02g01539 02 18348607 18353915 ECH