Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01526 ATGAGAGCTGCTCCTGCTCCTGAATCTTCTTCTGCTGCTGCACTGCCTCCAAAAACATGTGATGTTTTTATCAACTTTAGAATTGAGGATACCATAAGAAGCCTCGTTAGATATGTGGTCAGGACAGAGATGACCCGCATAGCTGATAGACTTGGTGAGATTGAACAATTACGTGTGGAATGCATTGAAAAGTCACGTGTTGCAGTGGGCATTTATTCAGAGAATTATGATTATCCGAAATGGTGTTTGGATGAGGTTGCGGGAAAAATGGCATGCAAGAAAACAGAACAGAATGTGATACCAGTGTTCTACAACATAGACCCATCACTTGTTGCTCAAGGGCTTGGATATTTGCATGCATCTACCAAACAGATTATTTATCGTGATTTCAAGTGCTCTAACATTTTGCTTGATGGGGCTTATAATGCAAAGCTTTCAGATTTTGGGTTGGCAAAGTTTGATTTCCACGGAGATACAGAATCCATGGCCCTTGGTGGGTTTGCCTCCAATAACAAGGATGAAGTGACCTCCAAACTAATCAATGATGCTAACAAGGCAAGCCatcatatttgtttttcctctAGTAAATTACTTCTATGTTGTCATTA 608 0.3964 MRAAPAPESSSAAALPPKTCDVFINFRIEDTIRSLVRYVVRTEMTRIADRLGEIEQLRVECIEKSRVAVGIYSENYDYPKWCLDEVAGKMACKKTEQNVIPVFYNIDPSLVAQGLGYLHASTKQIIYRDFKCSNILLDGAYNAKLSDFGLAKFDFHGDTESMALGGFASNNKDEVTSKLINDANKASHHICFSSSKLLLCCH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01526 202 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 130 IPR035897 -
Bva02g01526 202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Bva02g01526 202 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 14 116 - -
Bva02g01526 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01526 202 Gene3D - 17 133 IPR035897 -
Bva02g01526 202 SUPERFAMILY Protein kinase-like (PK-like) 111 159 IPR011009 -
Bva02g01526 202 Pfam TIR domain 59 125 IPR000157 GO:0007165
Bva02g01526 202 ProSiteProfiles TIR domain profile. 18 134 IPR000157 GO:0007165
Bva02g01526 202 PANTHER TMV RESISTANCE PROTEIN N-LIKE 14 116 - -
Bva02g01526 202 Pfam Protein kinase domain 111 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01526 Bva-Chr2 18268590 18269647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01526 112 163 Glycoside Hydrolase AT3G07070 56.604 1.05e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva02g01526 Pkinase 3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01526 - - mtr:MTR_3g058720 85.5001