Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01520 ATGGCCTCCCCTTCTTCTTCGCCTATAGACGACCCCAACCCGACCGCTGATCCACCCTCCGCCGTTCCCCTCCCTCTCCCTACCCCGCCCTCCTCTCGCCGCCTTCCTCCGCCGTGCTGGTCCCACGACGAGACTGTGGCCCTCATCGATGCTTACTGTGACAAGTGGTACTCCCTGGGTCGTGGCAATCTCAAGGCTACCCACTGGCAAGAGGTCGCCGATGCCGTCACGCGCCGATGCCCCAATGCTTCCCCGCCTAAAACTGCCGTCCAGTGTCGTCACAAGATGGAGAAACTCCGCAAGCGCTACCGCACCGAGATCCAACGTGCCCGGTCCTTGCCCGTTTCTCGATTCAATTCCTCTTGGGTCCACTTCAAGCGCATGGATGCCATGGAGAAAGGTCCCGCCGCCGTCAAACCTGAGAACAATTCTGACAGCCCCGATGAAATGGACCACGACGATGATGACGAGGACCAAGATTTGTACGAGGAATTCAAGAACGGCGGTGGATCTAACACTAGGAGCTTGAATAAATTGTATCGGAACGGAATCGGTGGTTCCGGTGGCGGTGGTAGCGGAGGTAACGGAGGGTTCAGGATCCGGATCCCAACTGGGGTGAGTATAGCACAACCCCCGTCTAAATTCTATGGGAAGGTTCCTGATCAGAAATTTAACCCCAATTCAAACCCTACCCCAAGCTCTAATTGTAGTCCCAGTTATGGGACTAGGGTTTTGAAAGACAGAGGGGGATTGGGGAAGAgggagaaggaaaaggaaagagaccCAGTTGGTGAAATGGTCTCTGCAATCAAAGTTTTGGGAGATGGGTTTGTGAGGATGGAGCAGATGAAGATGGAGATGGCTAGAGAAATTGAAACTATGAGAATGGAGATGGAGATGAAGCGCACAGAGATGATTTTGGAGTCTCAACAGCGAATAGTGGAAGCTTTTGCCAAAGCAGTgtcagagaagaagaagaaagcaaagagaaTGCCATCGCCACCAGAACCATA 1013 0.5104 MASPSSSPIDDPNPTADPPSAVPLPLPTPPSSRRLPPPCWSHDETVALIDAYCDKWYSLGRGNLKATHWQEVADAVTRRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKRMDAMEKGPAAVKPENNSDSPDEMDHDDDDEDQDLYEEFKNGGGSNTRSLNKLYRNGIGGSGGGGSGGNGGFRIRIPTGVSIAQPPSKFYGKVPDQKFNPNSNPTPSSNCSPSYGTRVLKDRGGLGKREKEKERDPVGEMVSAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKKAKRMPSPPEP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01520 337 Coils Coil 93 113 - -
Bva02g01520 337 MobiDBLite consensus disorder prediction 132 175 - -
Bva02g01520 337 MobiDBLite consensus disorder prediction 222 241 - -
Bva02g01520 337 MobiDBLite consensus disorder prediction 11 36 - -
Bva02g01520 337 Gene3D - 40 105 - -
Bva02g01520 337 MobiDBLite consensus disorder prediction 247 263 - -
Bva02g01520 337 Pfam Myb/SANT-like DNA-binding domain 38 131 IPR044822 -
Bva02g01520 337 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 333 IPR044823 -
Bva02g01520 337 SMART 118neu2 47 136 IPR006578 -
Bva02g01520 337 MobiDBLite consensus disorder prediction 209 263 - -
Bva02g01520 337 MobiDBLite consensus disorder prediction 1 36 - -
Bva02g01520 337 MobiDBLite consensus disorder prediction 147 162 - -
Bva02g01520 337 PANTHER TRANSCRIPTION FACTOR 4 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01520 Bva-Chr2 18248205 18249758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01520 39 138 Trihelix Transcription Factor Family AT3G14180 36.000 4.29e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva02g01520 Myb_DNA-bind_4 4.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01520 - - jre:108989991 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01520 02 18248205 18249758 Bva02g01520 02 18248205 18249758 ECH