Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01512 ATGAACATTTTAGCTGAATCTTCTTTTAAGAAGATGTCCCGGGCTAATGGTAAGTCTTCAGGTTGGGCAGCTTTTGATCTccagcaaaaacaaaaacaaggcCCTGAACATGAAGTCAACAAGGATCCTTTTCCTCCTATATCAGGCACTACTGATTCTTTGAGACCTTGTGAGAAGTTACCCGGAAATAACCATGTTCCTCCAAAGTCTTTCTCATCCGTACTGCTCCCTTCTAAAAACTTTCCTGCTTTGAAAGAGAATGGGAACAACCAAACAACATTGTTAGGTTTTGATTCTGACAGCAGACATCAAAGAAGTGTTCCTGAGAAAAATGCCAATTTAGCAATAAGGAAGCTCAAAGACCACCATACTTGGGCAGAAAATAGCTTGGTTGAGGATATCTTAGCTGCTGTTGATAATAGTATTGATAGGGCCTCAACTATTTTGGAGGCAATGGCTCCTGCAGTCAGTTTTGAAGACCACAAACCATCTAACACTCCTCAACAAGCTACTTCTGATGAGAAGACTGgtaatagtttttcttttggaaaggTCATTGATGGTGCTCCCTTAAGTTCTACTCTTGTTGATCATCTTAGGGACAATGTCGAAGACTTGGTGGGTGGAAATGATTCCTTGAGTCAAAAAATCTCTGATGATAGCAACCTTCTACGCAATATGCAACTCTTGAATTATGTCCCAGTTGAGCCTGAGTGGGAGGATGATGATGTTTACATTAGCCATCGGAAAGATGCATTGAGGATGATGAGGTCTGTGTCTCGACATTCAAGGGCAGCCACAAACGCTTTTCATAGAGGTGACCATGTTTCTGCCCAACAGCACTCCCTGAAGGCTCAGGAGGAATGGCATGTTGCAGAAGAACTTAATGCTAAGGCAGCCAAAGAAATTTTAGGTATCAGGAATAGCCAAAATGATATCTGGAGATTGGATTTACATGGCCTTCATGCAGCAGAGGCTATTCTAGCATTGCAAGAACATTTGCACAGAATAGAAAGCCTGGGACTATCAAAAGGTTTAACCTCTTTAAATGGAGTGAAGGAGAAGGATGGGACTATACCTTCAACTAATGATTCTCTTAATCACATGGATAAGGAGAAGTTGGATAAACCGCATGCACCATCAAGGCTGAGATCATCACCTTTACATGTCATAACAgGTGTAGGAAATCATAGCCGGGGACAAGCTGCTCTCCCTACAGCTGTGAGAAGTTTCCTCAATGAAAATGGATACCGCTTTGAAGAGATGAGACCAGGGAACGGCAGCAAGCGACGCCTAAGAGTTACTGTTGATTTTTCGCATTTTCGAGTTTGTTTCTGTGATCGAAGGAATTTACCTGTTATCTTAATCATGGCTACTAGGCTTATGTTTGAGAATTCTTGTGAAGTTGGGGTGTTTTCAAAGCTTACAAACGCCTATTGTTTGGTTGCTATTGGAGGTTCTGAAAGCTTCTACagTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTGGTTAAGACCTCCATTTCTGGCACTCGGATTGTTGGTCGCCTTTGTGttggGAACAAGAATGGGCTTCTCTTGCCACACACCACCACTGACCAAGAGCTTCAACATTTGAGGAACAGTCTTCCCGATCAAGTTGTTGTTCAACgcatagaagaaaaattatccgCTCTAGGAAATTGTATTGCATGCAATGATCATGTTGCCCTCGCTCACACTGATCTTGACAAGGAGACAGAAGAAATGATTGCTGATGTTCTTGGAGTAGAAGTTTTTCGGCAGACTATTGCTGGCAATATTCTTGTCGGCAGTTACTGTGCCTTCTCCAACAGAGGTGGTTTGGTCCACCCCCATACCTCCATTGAAGACTTGGATGAACTTTCTACGCTTCTTCAGGTTCCTTTGGTGGCTGGAACTGTGAATCGCGGCAGTGAAGTAGTAGCTGCTGGCATGGTAGTTAATGATTGGATTGCCTTCTGCGGGTCAGACACCACAGCAACAGAACTCTCTGTGGTTGAGAGTGTTTTCAAGTTGAGGGAATCCCAACCTAGTGCCATTGTGGATGAGATGAGGAAGTCACTGATTGATAGCTATGTTTG 2105 0.4185 MNILAESSFKKMSRANGKSSGWAAFDLQQKQKQGPEHEVNKDPFPPISGTTDSLRPCEKLPGNNHVPPKSFSSVLLPSKNFPALKENGNNQTTLLGFDSDSRHQRSVPEKNANLAIRKLKDHHTWAENSLVEDILAAVDNSIDRASTILEAMAPAVSFEDHKPSNTPQQATSDEKTGNSFSFGKVIDGAPLSSTLVDHLRDNVEDLVGGNDSLSQKISDDSNLLRNMQLLNYVPVEPEWEDDDVYISHRKDALRMMRSVSRHSRAATNAFHRGDHVSAQQHSLKAQEEWHVAEELNAKAAKEILGIRNSQNDIWRLDLHGLHAAEAILALQEHLHRIESLGLSKGLTSLNGVKEKDGTIPSTNDSLNHMDKEKLDKPHAPSRLRSSPLHVITGVGNHSRGQAALPTAVRSFLNENGYRFEEMRPGNGSKRRLRVTVDFSHFRVCFCDRRNLPVILIMATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSAFEAELADVIPVVKTSISGTRIVGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEEKLSALGNCIACNDHVALAHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVVAAGMVVNDWIAFCGSDTTATELSVVESVFKLRESQPSAIVDEMRKSLIDSYV 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01512 701 MobiDBLite consensus disorder prediction 366 382 - -
Bva02g01512 701 MobiDBLite consensus disorder prediction 1 15 - -
Bva02g01512 701 Pfam Domain of unknown function (DUF1771) 245 308 IPR013899 -
Bva02g01512 701 Pfam eIF-6 family 460 659 IPR002769 GO:0042256|GO:0043022
Bva02g01512 701 Gene3D - 457 681 - -
Bva02g01512 701 SMART SMR_2 313 437 IPR002625 -
Bva02g01512 701 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 457 701 - -
Bva02g01512 701 SUPERFAMILY SMR domain-like 385 425 IPR036063 -
Bva02g01512 701 MobiDBLite consensus disorder prediction 1 50 - -
Bva02g01512 701 SMART eIF6neu2 459 660 IPR002769 GO:0042256|GO:0043022
Bva02g01512 701 MobiDBLite consensus disorder prediction 158 179 - -
Bva02g01512 701 ProSiteProfiles Smr domain profile. 316 437 IPR002625 -
Bva02g01512 701 MobiDBLite consensus disorder prediction 161 179 - -
Bva02g01512 701 Gene3D - 292 427 IPR036063 -
Bva02g01512 701 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 457 701 IPR002769 GO:0042256|GO:0043022
Bva02g01512 701 CDD IF6 458 679 IPR002769 GO:0042256|GO:0043022
Bva02g01512 701 SMART DUF1771_2 244 309 IPR013899 -
Bva02g01512 701 SUPERFAMILY Pentein 457 680 - -
Bva02g01512 701 MobiDBLite consensus disorder prediction 353 382 - -
Bva02g01512 701 Pfam Smr domain 316 428 IPR002625 -
Bva02g01512 701 TIGRFAM eIF-6: putative translation initiation factor eIF-6 460 680 IPR002769 GO:0042256|GO:0043022
Bva02g01512 701 Hamap Translation initiation factor 6 [eif6]. 446 701 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01512 Bva-Chr2 18190546 18198754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01512 457 701 Eukaryotic Initiation Factors Gene Family AT3G55620 88.571 4.99e-163 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01512 K03264 - gmx:100809786 476.863