Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01500 ATGTCCTTCAATCAATCAAGGTCCGATAAGAACGACACTCAATACCGAAAATCCGGGCGATCAGGAAGCTCGAATCAGCAGCGAGGTTCCTCAGGCGCGTTCGTCAAAGGCGGCGGCGGCGGGCCCGCGCCTTCACCGTCGATCACCTCGGGTTCATCACTCTCATCTAACCGGAGttttaagAAGTCTAATAATGCACAAGGAGGGCAATCCGGTGTAAATCCATCCACTGTGAATTCAACCGAGTCTACTAGTGCTTCTACATCTCGGACTATACAGAATGGTACACATGTACAGCCAAAATTACATGCAGCATCTGATGCGCCGGTTACAAATGCAAGTGCCAAATCAAATGAACCATCAACTACTCAGAGGAGCACCAGAACTGTTCCGAAAGCTCCAACTTCTCAACCTCCCCCCATGAGCTCTGATCCAGCAGCTCCCACAACCCCTGCAAAGACAACTGGAGATGCATCCAAGACATTCCCTTTTCAGTTTGGAACTCTTAGTCCTGGTTTTATGAATGGAATGGCAATCCCTGCCCGTACCAGCTCAGCTCCGCCTAATTTGGATGAGCAGAAACAACACCAGgCACTTCATGAGTCTTACAGATCTGTAGTACCTTCAGTGCCCACACCACCTGTCCCCAAACAGCAACCACCAAGGAAGGATGCAGGTGTTGCAGACCAATCTAATTCTAGGGAGGCAAATCCAGGGACAAGGGTCAAAAAGGACCCTCAGGTGTCGCCTTCGCCCCATGCAAGTCAGATGCAGAAGCCTTTTGTTGTCCCCATGACTGGGATTTCAATGCCAATGCCTTTTCATCAGTCACAGGTGCAACAGCAGGTTTTTCTTCCACGTCTTCAACCCCATCCTATGCATTCGCAAGGAATCATGCAAGCCCAGAACATGAGTTTCACTCCTCAAATGGGACATCAGTTGCCCCATCAGTTAGGCAACATGGGCATCAGCACCACCCCGCAATATCCTCAGCAGCAAGGAGGAAAATTTGGTGGTCCTCGTAAAACTACTGTCAAGATCACTCATCCTGAAACACACGAGGAATTGAGGCTTGACAAAAGAGCAGATACGTATTCAGAGGGGGTTTCATCAGGTGCAAGGTCTCACCCTAATGTACCTTCTCAATCCCAACCTGTTCAGTCATTTGGTGCTTCTCATCCTACAAACTACTATCCACCCAGCTCCTATAATACCAGCTCGCTGTTTTTCCAATCTCCTAATTCTCTTCCCTTAACAAGTAGCCAAATAACTCCAAATTCTCAGGCACCGAGATTTAACTATCAGGTGAACCATGGACCACAAAATGTGAGTTTCATTAATCCATCATCTCTTAGTTCTGTGCCTGTTGGGAAAACTGGTGCTCCAATTCTTGGTGTCCCTGAACCAGCTAGTGCAGAACATTCTCGTGATGTGCATAATGTAATCTTATCAGCGCCACCAGCAGCAAGTTCTGTTACTATAAAGCCAAGTAGTGGTTCTGGTGTTGAAAAAAGTGAATCTCCTAGTTCTTCAGGAGCATCCAGTGATGCTCCCTCCTCTGTGCCTCAAAGAGTGGTTGAAACTCATGCTGATATCTCTTCACAACCATCTAAGTCATCTAGTGAGGCTTCTAATCTGTTGCCAAAACAATCTGCAGCTGCATCTGTTGCTCCTTCTACTGAGAACCTTACAACTGCCACATCTATTCCTGCGCTGAATGCTGTCAGTGAAGATTCTGTTTCAGCTGGGTCCAACAATGAAGGCAAGTGTAAGGAATCTCTTAGCAGGTCAAACTCTCTGAAAGATAATCAGAAGAAACCCGGAAAGAAAGGTCAATCACAGCATCAgGTTGCTGTACAGTCTCATGCGGTGGCAACTGTGCCATCTGAAGGTGGTGTATCTGATAATGGAGTTTCTGAAAGTGTAAAATCTAAAGCAAACCATTCTAATGCAATATGTAGTGATGACATCCCAGCAACTGAAGACATACCATCAACTACTGGTGGTTCTGTTAACTGTTCTATGGAAGTTTCTGGTTCTCAGTCTGTTGATAGTTTGAACAATCAGAATCATGATAAACTTGAGAAGTTGTCACAGCATGATAAACTTTTAGACCAGAATATACCAGAAATGAGTGATAATAATGACAGAAGACCTTCTGAAGGTCCCAAACAGAATTTTAACGATAGTGGCTCTTCTGTGGAATCTGTAACTTTGAAGTCCATCAAATGTGAAGAACCTGAAGAAGATGCAGCGAAATTAAGGGCTGAAGTCCTAACCCCAAGGACTGTGCAGCAAGGGAAAGAAGAATCTATAAGTTCTAATGCTGAATGTGACAAGATGGGAGAAAATTTAGGCATGTCTACGTTCACTGTATTGGATTCTAGAGATGCTGCCTCTTTGAGTAGAAGTGATAGTGTAGTTAGTACTGAATCTGCTAATGCATATTTTGGGGCATCTGATCAGCAATCCTCTTCTGCAACAGAAGCAAGTTCAAACAACAGCAAGGATAGTGCAGAGAATTCTGGGAGTGGGTCAGCATCCCTTCCACTTTCAGGTACCAAGGATAAACCTGTTTTCGAACCAAATAAGGTGAAAGCTACttcaaaaaacaagaaaaaaaggagagaataTCTTCAAAAAGCAGATGCTGCGGGGTCAACATCTGATCTATATAATGCATATAAGGGACctgaggaaaagaaagaaactgttGTAAGTGCAGAGAGTACTGAAAGTACATCTCCTTCTGGCAGTTCAAAGCAGTTGCCTACAGATGCTGCTCAGCCTGATGCTATTGCAAGTGAGAAAGTCGGACAGGGGAAAGCTGAGCCTGATGATTGGGAAGATGCTGCTGACATGTCTACACCAAAATTGGAAGTTTCAGATAAAATGCTACAGGATGGGAGTGGGAGTACTGccaaaaaatattcaagagATTTTCTATTGAAATTTGCTGAGCAATGCACTGATCTTCCGGAGGCATTTGAAATTAGGGCAGACATTGCTGAAGTTTTAATGAGTTCTAATATTAGTGGTTCTCATGTTCTTGAACGAGAACCGTATCCTAGTCCTGGAAGGTCTGGTGTGGTGTCCCGAATGGACCGTCGTGGAAGTGGTGTGATTGAGGAAGACAGATGGAATAAAGCTTCAGTGAATTTTACTTCAGGACGTGATATGCGATTGGATACTGGTTTTGGAGGTAATGTAGGATTTCGACCTAGCCCAGGAGGCAATTTTGGTGTTTTAAGGAACCCACGTGTACAGTCCCCTGTGCAATATTCTGGAGGGATCCTTGCTGGCCCAATGCAATCCATGGGGCCTCAGGGAGGAATACAAAGGAATAACCCTGATGGTGAAAGGTGGCAGCGAGCTAATAACTTCCAAAGGGGATTaattccttctccttctcagGCACCTTTACAGATGATGCATAAAGCTGAGAAGAAGTACGAGGTGGGTAAAGTGACAGATGAGGAAGAGGCCAAACAGAGGCAGTTGAAAGCTATCCTAAACAAGCTAACGCCTCAGAATTTTGAGAAACTTTTTGAACAGGTTAAAGCAGTTAACATTGACAATGCTATGACCCTTACTGGCGTCATCTCACAGATCTTTGAGAAGGCATTGATGGAGCCGACGTTCTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTTCAGAATTGCCTGATTTTAGTGAGGACAATGAGAAGATAACGTTTAAGAGATTATTATTGAACAAGTGCCAGGAGGAGTTTGAGAGAGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGTTGATGAGGGTGAGGTCAAGCAGTCTGCTGAGgcgagagaagagaagagaactAAGGCGCGAAGACGCATGTTGGGTAATATTAGATTGATTGGTGAGctatataagaagaaaatgttgacAGAGAGAATAATGCACGAGTGTATACAGAAGTTACTGGGTCAATACCAGGATCCTGATGAAGAAGATGTTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCGAAGGCCAAGGAACATATGGATTTGTATTTTGAAAGGATGAAATTGTTTTCTAACAATATGAATTTGTCTTCCAGAGTGAGGTTCATGTTGAAAGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGCACAGGACAGGCAGCTGCAAACTGGTAGGATGGGTCGTGGTCCTGGCAGTAATGCTTCAGGAAGAAGAATGCCTATGGATTTTGGTTCAAGAGGGTCACCTATGTTGTCTTCTCCTAATGCTCAGATTGGTGGAATGCGTGGGCTGCCTACTCAAGGTCGTGGCTTTGGTTCTCAGGATGTTCGATTTGATGATAGGCAGTCTTACGAGGCTAGGACCTTGTCAATGCCCTTGCCTCAAAGGACTCTAGGTGATGATTCTATCACCTTGGGGCCCCAAGGTGGTCTTGCTAGAGGAATGTCCCTAAGAGGAGCAACTACATTTTCAAGTCCGCCTGTTTCTGATGTTTCTACTGGCCCTGGAGACTCGCGAAGAATGTCTAATAATCCTAATGGTTATGGTCACATTTCAGAACGTGCACCAACCAGCTCAAGGGAGGATCTTGTGCCAAGATATATTCCGGATAGATTTGCAGGCCCAACTGCTTACGAGCAATCAAGTTCTCAAGAGCGCAATATGAACTATGGTAGCAAGGACTTGAGAAATGCAGATAGGAGCTTTGACAGGCCCATTGCAACTTCACCTGCTCGAGTGCAAGTGCAAGGACCAACAGTTTCCCAGAATGCTTCTTCAGATAAGGTTTGGCCTGAAGAGCGACTGCGGGACATGTCCATAGCAGCAATCAAAGAATTTTACAGTGCTGTAGATGAGAAAGAAGTTGCTTTATGTGTGAAAGAGATGAACTCCCCCAGCTTCCATCCTACCATGGTCTCTCTTTGGGTTGCTGACTCTTTTGAGAGGAAGAACCCCGAAAGAGACCTTGACCTTTTGGCGAAATTGCTTGTCAACCTTTCGAAGTCTCAGGATGGAACCTTGAATCAAGCCGAGCTGATGAAAGGGTTTGAATCTGTTCTTGCTACACTGGAGGATGCTGTTACCGATGCGCCTAGAGCACCAGAATTTCTTGGTCGCATATTTGCAAGAGTTATAACAGAGAATGTGGTATCTTTGAGAGAGATTGGGCGACTGATACATGAAGGTGGGGAGGAGCCAGGCCTGCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACATTGGAGGCAATAAAATTGGAGAAGGGAGATGCTTTTCTAAATGAGATCCGGACGAACTCCAATTTAAAGTTGGAGTCTTTCCGGCCACCCGATCCTATTAAATCAAGGAAGTTAGAGAAATTTCTTTA 5447 0.4379 MSFNQSRSDKNDTQYRKSGRSGSSNQQRGSSGAFVKGGGGGPAPSPSITSGSSLSSNRSFKKSNNAQGGQSGVNPSTVNSTESTSASTSRTIQNGTHVQPKLHASDAPVTNASAKSNEPSTTQRSTRTVPKAPTSQPPPMSSDPAAPTTPAKTTGDASKTFPFQFGTLSPGFMNGMAIPARTSSAPPNLDEQKQHQALHESYRSVVPSVPTPPVPKQQPPRKDAGVADQSNSREANPGTRVKKDPQVSPSPHASQMQKPFVVPMTGISMPMPFHQSQVQQQVFLPRLQPHPMHSQGIMQAQNMSFTPQMGHQLPHQLGNMGISTTPQYPQQQGGKFGGPRKTTVKITHPETHEELRLDKRADTYSEGVSSGARSHPNVPSQSQPVQSFGASHPTNYYPPSSYNTSSLFFQSPNSLPLTSSQITPNSQAPRFNYQVNHGPQNVSFINPSSLSSVPVGKTGAPILGVPEPASAEHSRDVHNVILSAPPAASSVTIKPSSGSGVEKSESPSSSGASSDAPSSVPQRVVETHADISSQPSKSSSEASNLLPKQSAAASVAPSTENLTTATSIPALNAVSEDSVSAGSNNEGKCKESLSRSNSLKDNQKKPGKKGQSQHQVAVQSHAVATVPSEGGVSDNGVSESVKSKANHSNAICSDDIPATEDIPSTTGGSVNCSMEVSGSQSVDSLNNQNHDKLEKLSQHDKLLDQNIPEMSDNNDRRPSEGPKQNFNDSGSSVESVTLKSIKCEEPEEDAAKLRAEVLTPRTVQQGKEESISSNAECDKMGENLGMSTFTVLDSRDAASLSRSDSVVSTESANAYFGASDQQSSSATEASSNNSKDSAENSGSGSASLPLSGTKDKPVFEPNKVKATSKNKKKRREYLQKADAAGSTSDLYNAYKGPEEKKETVVSAESTESTSPSGSSKQLPTDAAQPDAIASEKVGQGKAEPDDWEDAADMSTPKLEVSDKMLQDGSGSTAKKYSRDFLLKFAEQCTDLPEAFEIRADIAEVLMSSNISGSHVLEREPYPSPGRSGVVSRMDRRGSGVIEEDRWNKASVNFTSGRDMRLDTGFGGNVGFRPSPGGNFGVLRNPRVQSPVQYSGGILAGPMQSMGPQGGIQRNNPDGERWQRANNFQRGLIPSPSQAPLQMMHKAEKKYEVGKVTDEEEAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAMTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKQSAEAREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIQKLLGQYQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDLYFERMKLFSNNMNLSSRVRFMLKDTIDLRKNRWQQKRKVEGPKKIEEVHRDAAQDRQLQTGRMGRGPGSNASGRRMPMDFGSRGSPMLSSPNAQIGGMRGLPTQGRGFGSQDVRFDDRQSYEARTLSMPLPQRTLGDDSITLGPQGGLARGMSLRGATTFSSPPVSDVSTGPGDSRRMSNNPNGYGHISERAPTSSREDLVPRYIPDRFAGPTAYEQSSSQERNMNYGSKDLRNADRSFDRPIATSPARVQVQGPTVSQNASSDKVWPEERLRDMSIAAIKEFYSAVDEKEVALCVKEMNSPSFHPTMVSLWVADSFERKNPERDLDLLAKLLVNLSKSQDGTLNQAELMKGFESVLATLEDAVTDAPRAPEFLGRIFARVITENVVSLREIGRLIHEGGEEPGLLLEVGLAADVLGSTLEAIKLEKGDAFLNEIRTNSNLKLESFRPPDPIKSRKLEKFL 1814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01500 1814 MobiDBLite consensus disorder prediction 577 592 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 593 608 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1495 1550 - -
Bva02g01500 1814 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 70 278 IPR045208 GO:0003743
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1016 1036 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1386 1431 - -
Bva02g01500 1814 Gene3D - 1163 1398 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1255 1282 - -
Bva02g01500 1814 SMART ma3_7 1625 1741 IPR003891 -
Bva02g01500 1814 Coils Coil 1245 1265 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 488 560 - -
Bva02g01500 1814 Gene3D - 1618 1814 - -
Bva02g01500 1814 ProSiteProfiles MI domain profile. 1624 1750 IPR003891 -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 723 738 - -
Bva02g01500 1814 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 262 1804 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1508 1543 - -
Bva02g01500 1814 SUPERFAMILY ARM repeat 1157 1387 IPR016024 -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1386 1409 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 907 925 - -
Bva02g01500 1814 SMART if4_15 1163 1385 IPR003890 GO:0003723|GO:0005515
Bva02g01500 1814 MobiDBLite consensus disorder prediction 815 850 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 17 32 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 109 131 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 631 686 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 367 389 - -
Bva02g01500 1814 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 262 1804 IPR045208 GO:0003743
Bva02g01500 1814 MobiDBLite consensus disorder prediction 699 722 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 815 949 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 699 781 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 740 755 - -
Bva02g01500 1814 SUPERFAMILY ARM repeat 1620 1809 IPR016024 -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 45 100 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 146 167 - -
Bva02g01500 1814 Pfam MIF4G domain 1163 1384 IPR003890 GO:0003723|GO:0005515
Bva02g01500 1814 MobiDBLite consensus disorder prediction 363 389 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 1 256 - -
Bva02g01500 1814 Pfam MA3 domain 1631 1739 IPR003891 -
Bva02g01500 1814 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 70 278 - -
Bva02g01500 1814 MobiDBLite consensus disorder prediction 577 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01500 Bva-Chr2 18098891 18107377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01500 792 1813 Eukaryotic Initiation Factors Gene Family AT3G60240 55.725 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01500 K03260 - gmx:100796636 2084.3