Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01498 ATGGTTGGCCATGATTTCAACTCTGATATCAATGACTTTGCAAACATTAACTGGGAAGATTTGGAGAAGGAGCCCTCTCTCTTCTCAATCTTCAGAAGCTTCCTAGAGAATCCGCTCTGTGTTCCCCAAGACCCCATTGAGGACATAGAATGGTATCCCAACTTCATTGACAGCCCCATTTCCTTGAATCCTTTGGAATTCTTTGAGGATCATATGTTGTTTCAGAACCATGGGACCGAGCAACAAGAACATGggattttgttgaaaaacaaGCCATTGTCTTGGAAGAATTCAGACCGGCTGGAGTACAAGGACAAGTTTGTGAAGCTGTCTGATATTCAGAACTTGGCGATGCCCGTTTCGGttcagaagaaagaagaaacgtGTTTGCctgcttcttcctcttcaaaGAAGAAGCCAAGAGCAAAGAGGGATAGTCGCAAAGCATGGCTGAAAAGTGCTGCTGGTTTTGAGAATCTGGGAAGTGTGAGCAAGAAAAGCTGCAGCCATTGTGAGAGTGAAGAGACTCCTTTGTGGAGGAATGGCCCTTTGGGGCCAAAAACTCTGTGCAATGCTTGTGGTGTGAGATATGCATCTGGTAGATTGCTGCCAGAGTATAGACCTGCTGCTAGCCCTACTTTTGATAGCAGAAAGCATTCTAATTTTCATAGCAAGATAATCAAGAAAGACAGAACTTG 698 0.4126 MVGHDFNSDINDFANINWEDLEKEPSLFSIFRSFLENPLCVPQDPIEDIEWYPNFIDSPISLNPLEFFEDHMLFQNHGTEQQEHGILLKNKPLSWKNSDRLEYKDKFVKLSDIQNLAMPVSVQKKEETCLPASSSSKKKPRAKRDSRKAWLKSAAGFENLGSVSKKSCSHCESEETPLWRNGPLGPKTLCNACGVRYASGRLLPEYRPAASPTFDSRKHSNFHSKIIKKDRT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01498 232 ProSitePatterns GATA-type zinc finger domain. 168 193 IPR000679 GO:0006355|GO:0043565
Bva02g01498 232 PANTHER GATA TRANSCRIPTION FACTOR 25 231 - -
Bva02g01498 232 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 166 222 - -
Bva02g01498 232 CDD ZnF_GATA 167 218 IPR000679 GO:0006355|GO:0043565
Bva02g01498 232 Gene3D - 163 230 IPR013088 GO:0006355|GO:0008270
Bva02g01498 232 ProSiteProfiles GATA-type zinc finger domain profile. 162 197 IPR000679 GO:0006355|GO:0043565
Bva02g01498 232 SMART GATA_3 162 212 IPR000679 GO:0006355|GO:0043565
Bva02g01498 232 MobiDBLite consensus disorder prediction 213 232 - -
Bva02g01498 232 PANTHER GATA TRANSCRIPTION FACTOR 4-LIKE 25 231 - -
Bva02g01498 232 Pfam GATA zinc finger 168 202 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01498 Bva-Chr2 18084661 18085359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01498 26 231 C2C2-Gata Transcription Factor Family AT4G32890 34.259 2.16e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva02g01498 GATA 1.9e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01498 - - twl:120003046 161.384