Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01466 ATGTCGTCTTCAGGGGAGCGCGGGATGGAACCGGACGACTCAACCGTTGTCGACCTCGACGGTTCACTTGCCGGAGAAGGGGGCGGCGGTGACGGCTGCAGTGGGGATGAGGGGTTGGCGGGGATTGGTGACGGTGGTGGAAGTAGCTCTAAGGGAGGCAGAGACAGAGTAAAGGGGCCTTGGTCGCCGGAGGAGGACGCCATTCTTAGTCGACTCGTTAGCAAGTTCGGTGCCAGAAATTGGAGTTTAATTGCTCGTGGGATCGCCGGAAGATCCGGCAAATCTTGCCGTCTGCGGTGGTGTAATCAGCTTGATCCTGCTGTAAAACGCAAGCCCTTTACTGATGATGAAGACCGGATCATAGTTGCTGCACATGCAATCCATGGAAACAAATGGGCAGCCATTGCCAGACTTCTACCAGGAAGAACAGACAATGCCATTAAGAACCACTGGAATTCCACTCTGAGGCGTCGGGGGGTGGAGCATGACAAGATTAAGTTAGACTCTAGCAACTTAGTCGAAGATTTTTGCATGGACAAAGCAAAAGCATCATCTGAAGAGACTCTGTCATATGGGGATGTTAATTCCTTGAGATCCTCCGAAGGAAGAGATGCCAGTTCAATAGAGAACGCGGATGATAAATATGACGAAAAGTTACAGGTAGACGGTCAATTAGATCATGAAGTCAAGGATCCTCCTACTCTTTTCCGACCAGTAGCACGTTTCAGTGCCTTTAGCGTATATAGTAACTCTTCCGATGGTACAACATCGATTCAAAGGCCTGTTCCAATGGAAGGACCTCTTTTCCAAGCATCAAAACCAGATGCTGAAATTTGTAGAATGCTTGAAGGGCTTCACAGCGACCAGGCAGTGCCTCACCAGTGTGGCCATGGTTGCTGCACTGCTCAAGATggaaaaaatcagaaaagctCTTTGCTGGGACCGGAATTCGTGGAATTTTCAGAACCCGCGTCGTCTTTCCACAATTTTGAGTTGGCTGCAATAGCTACAGATATTAGTAACCTTGCCTGGCTCAAAAGTGGGTTGGAGAACAGTAGTGTCAAAATGATGGGTGATGCAGCTGGAAGGGTAGTATCTCATGGATCCCAAGTGCACATTGGTCATTA 1127 0.4854 MSSSGERGMEPDDSTVVDLDGSLAGEGGGGDGCSGDEGLAGIGDGGGSSSKGGRDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDDEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDKIKLDSSNLVEDFCMDKAKASSEETLSYGDVNSLRSSEGRDASSIENADDKYDEKLQVDGQLDHEVKDPPTLFRPVARFSAFSVYSNSSDGTTSIQRPVPMEGPLFQASKPDAEICRMLEGLHSDQAVPHQCGHGCCTAQDGKNQKSSLLGPEFVEFSEPASSFHNFELAAIATDISNLAWLKSGLENSSVKMMGDAAGRVVSHGSQVHIGH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01466 375 Gene3D - 57 109 - -
Bva02g01466 375 MobiDBLite consensus disorder prediction 1 62 - -
Bva02g01466 375 SMART sant 109 157 IPR001005 -
Bva02g01466 375 SMART sant 57 106 IPR001005 -
Bva02g01466 375 MobiDBLite consensus disorder prediction 194 213 - -
Bva02g01466 375 CDD SANT 112 155 IPR001005 -
Bva02g01466 375 SUPERFAMILY Homeodomain-like 55 151 IPR009057 -
Bva02g01466 375 Gene3D - 112 158 - -
Bva02g01466 375 ProSiteProfiles Myb-like domain profile. 105 155 IPR001005 -
Bva02g01466 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 159 IPR017930 -
Bva02g01466 375 Pfam Myb-like DNA-binding domain 61 118 - -
Bva02g01466 375 CDD SANT 60 102 IPR001005 -
Bva02g01466 375 PANTHER - 29 352 - -
Bva02g01466 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 108 IPR017930 -
Bva02g01466 375 ProSiteProfiles Myb-like domain profile. 53 104 IPR001005 -
Bva02g01466 375 PANTHER MYB PROTEIN-RELATED 29 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01466 Bva-Chr2 17924038 17927011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01466 47 375 MYB Transcription Factor Family AT3G09230 53.687 5.62e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g01466 Myb_DNA-bind_6 5.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01466 K09422 - gmx:100811740 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01466 02 17924038 17927011 Bva02g01466 02 17924038 17927011 ECH