Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva02g01465 | ATGCACCAGATAATAACCCACAGTTTTATTTTTAAGAGTTTCGGAAGCGGCAAGTGTGGCTGCAATCTTAGCCATGGATATAGATCTCAGAGCTGCAAAGTTAACTACTTAACTTCACAGAACCCATTAAAGTGTCACTGTCCATGTCTTGAACCAGAGCATGAGTCTCTGTCTCAAATGTCCAACGTAGAACTAGGGGGTCACCGGCGTTCGGTGGCGGGAAGTGACATGAGCGGCGACGGCAGCGTGTGTTTCTCTGATGCTGATGATGGCTCTTGCTATTCTCATTTCTATTCAACAAATGGCGGGTCTTATGACGATTACAGCTTCTCTTGTGTCTCTGATCCTGAGGTTGGGGGTGCTCCCGATTCTCGCAGAGTTTCTTCTGTTTCTGATTGTTCAGTGGTGGTGGAAATTGAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGgccaaaatagaaagagattGTAGAATTTGCCATCTGGGTTTGGAGAGTGACAGTCATGAGTGTGGGGTTCCAATTGAATTGGGATGTTCTTGTAAGGATGATTTAGCTGCTGCTCACAAAAACTGTGCCGAGGCCTGGTTTAAGATTAAAGGGAATAGGACTTGTGAAATTTGTCATTCTATTGCACAGAATGTCTATAGCACAACTGAGGAGATGAAAGAGAATTCAGCCGACAGCAACAATGCTAATGCAGCATCGACAGTCTCAACGCCGGCTCCAGGCCCCTCGACAGAAACTCAAAGGTCATTGCAAGAGGCTGCTCCATTCAATAATACCGAAATTGCGCAAGCACCTGATCTCTTTGTGTTTAATGCCGCTGCTGATGTGTGGGACATATCAGTATATATCTACTTGATTCTAGGGACCTCTATGCTGTCAAGTGCCAAACGCAAAAGGACACAttatgaactttg | 923 | 0.4399 | MHQIITHSFIFKSFGSGKCGCNLSHGYRSQSCKVNYLTSQNPLKCHCPCLEPEHESLSQMSNVELGGHRRSVAGSDMSGDGSVCFSDADDGSCYSHFYSTNGGSYDDYSFSCVSDPEVGGAPDSRRVSSVSDCSVVVEIESGVPEIKVHLAKIERDCRICHLGLESDSHECGVPIELGCSCKDDLAAAHKNCAEAWFKIKGNRTCEICHSIAQNVYSTTEEMKENSADSNNANAASTVSTPAPGPSTETQRSLQEAAPFNNTEIAQAPDLFVFNAAADVWDISVYIYLILGTSMLSSAKRKRTHYEL | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva02g01465 | 307 | MobiDBLite | consensus disorder prediction | 223 | 254 | - | - | |
Bva02g01465 | 307 | SUPERFAMILY | RING/U-box | 154 | 211 | - | - | |
Bva02g01465 | 307 | PANTHER | OS01G0850200 PROTEIN | 59 | 262 | - | - | |
Bva02g01465 | 307 | PANTHER | ZINC FINGER, RING-CH-TYPE | 59 | 262 | - | - | |
Bva02g01465 | 307 | SMART | ringv_2 | 156 | 209 | IPR011016 | GO:0008270 | |
Bva02g01465 | 307 | Pfam | RING-variant domain | 157 | 208 | IPR011016 | GO:0008270 | |
Bva02g01465 | 307 | CDD | RING_CH-C4HC3_MARCH | 157 | 209 | - | - | |
Bva02g01465 | 307 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 149 | 215 | IPR011016 | GO:0008270 | |
Bva02g01465 | 307 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 146 | 221 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva02g01465 | Bva-Chr2 | 17914749 | 17921130 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva02g01465 | 123 | 274 | C3H Transcription Factor Family | AT5G05830 | 49.342 | 9.90e-42 | 142 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva02g01465 | - | - | gmx:100808666 | 285.034 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva02g01465 | 02 | 17914749 | 17921130 | Bva12g01647 | 12 | 13999193 | 14001924 | ECH | |
Bva02g01465 | 02 | 17914749 | 17921130 | Bva02g01465 | 02 | 17914749 | 17921130 | ECH |