Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01456 ATGGCAGCAAATGGAGATGGTGAACAAGAATATGTACCACAGAAGAAGAAGCCACCGtctgaagaagagaagaggaagaagaaaattgttcCTGGAAGTTTGATGAAAGCTATAGTGAGACCTGGAGGAGGTGACTCGACACCTTCAGATGGTGACCAGGTTATATATCATCGCACAATTCGAACTTTGGAAGGAGTAGTTGTTGAATCTACCAGATCAGAGTATGGAGGTAAAGGCACCCCAATAAGACACGTTCTGGGAAAAAGCAAGATGCTATTGGGTTTGCTTGAAGGGATTCCCACAATGTTGAAGGATGAAGTGGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGCGAGGATGATTGTCCTATTTCTGCTCCTGATGGTTTTCCAAAGGAGGATGaacttcattttgaaattgagCTGATAGATTTTTCAAAGGCTAAGGTCATTTCTGAAGATTTGGGAGTTATAAAAAAGGTGCTACAAGAAGGGCAGGGATGGGAATCACCACGAGAACCTTATGAAGTGAAGGCTTGTATTACAGCAAGGACAGCTGGTGGGAAGTTGATTATGTCACATACAGAAGGAGAACCATACTCCTTTACATTTGGTAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGATCAATGTCACGAGGAGAGAAGGCTGTAGTTTATGTTACCAGTCAGTATTTAACTCAGTCTCCCCTGATTGCTGGGATTGAAGATTATGAAGAAGTTCTATTTGAAGTGGAGCTCGTCCACTTCATTCAAGTCAGGGACATGCTTGGTGATGGTCGCCTAATCAAACGACGGATTCGTGATGGGACAGGTGATTTCCCAATGGATTGTCCTCTTAATGACAGTCTACTTCGTGTTCATTACAAGGGCATCGTTCTTGATGATGAAAAGAGGGTATTCTATGATACAAGAGTTGATAATGATGGTCAACCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGACTTGAAATGTGTCTCCGTCTCATGCTGCCTGGAGAGTTAGCTCTTGTGACATGTCCCCCCGACTATGCTTATGACAAGTTTCCAAGGCCTGCAAATGTTCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTGGACTTTAAAAGTATAATGGATGAAGCTGAGAAGATCAGAAACACGGGGAACAAGTTGTTCAAAGAAGGAAAGTTTCAACTTGCTAAGGCAAAGTATGAGAAGGTGCTTCGAGAATTTAATCATGTTAATCCacaagatgatgaagaaggaAAGATATTTGCAGATACACGAaatttattatttctgaaTGTTGCTGCTTGCTATCTGAAAACGGGAGAATGCCTAAAGTCCATTGAGACTTGCAACAAGGTTTTGGAAGCAAATCCCGCTCATGTCAAGGGTCTTTACCGTCGTGGAATGGCCTATATGACTGCTGGAGATTTTGAAGAAGCAAGGAATGATTTTAATATGATGATTAAAGTTGATAAAACATCTGAACCAGATGCTACTGCAGCTCTTCAAAAGCTGAGGCAGAAGGAGCAGGAAACGGAGCGGAAGGCTCGAAAACAATTCAAAGGACTTTTCGACAAGAAGCCTGGAGAAATTTCAGAAGTTAAAGCTGATGAAGATGGAGAACATCAGAAGACGAGTGAAAACCAGGAGAACAGTGAGAATGGGGACTCAGATGGAGCAAATTCTGATGAATTTCACGAAGCCGCAGCAGAAGCACCGCAAGTGGGTTGGTTCTCTGTCTTTTGGCCTACGACCAGAAgatttttctcctctcttgGGCTGCAAAGATGTACCATACTATG 1871 0.4083 MAANGDGEQEYVPQKKKPPSEEEKRKKKIVPGSLMKAIVRPGGGDSTPSDGDQVIYHRTIRTLEGVVVESTRSEYGGKGTPIRHVLGKSKMLLGLLEGIPTMLKDEVAMFKMKPQLHYGEDDCPISAPDGFPKEDELHFEIELIDFSKAKVISEDLGVIKKVLQEGQGWESPREPYEVKACITARTAGGKLIMSHTEGEPYSFTFGKSEVPKGLEMGIGSMSRGEKAVVYVTSQYLTQSPLIAGIEDYEEVLFEVELVHFIQVRDMLGDGRLIKRRIRDGTGDFPMDCPLNDSLLRVHYKGIVLDDEKRVFYDTRVDNDGQPLEFCSGEGLVPEGLEMCLRLMLPGELALVTCPPDYAYDKFPRPANVPEGAHIQWEIELLGFEMPKDWTGLDFKSIMDEAEKIRNTGNKLFKEGKFQLAKAKYEKVLREFNHVNPQDDEEGKIFADTRNLLFLNVAACYLKTGECLKSIETCNKVLEANPAHVKGLYRRGMAYMTAGDFEEARNDFNMMIKVDKTSEPDATAALQKLRQKEQETERKARKQFKGLFDKKPGEISEVKADEDGEHQKTSENQENSENGDSDGANSDEFHEAAAEAPQVGWFSVFWPTTRRFFSSLGLQRCTIL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01456 623 MobiDBLite consensus disorder prediction 1 30 - -
Bva02g01456 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 381 IPR001179 GO:0003755
Bva02g01456 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 258 IPR001179 GO:0003755
Bva02g01456 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 45 144 IPR001179 GO:0003755
Bva02g01456 623 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 68 571 IPR031135 GO:0030154|GO:0042761|GO:0099402
Bva02g01456 623 SMART tpr_5 484 517 IPR019734 GO:0005515
Bva02g01456 623 SMART tpr_5 401 434 IPR019734 GO:0005515
Bva02g01456 623 SMART tpr_5 450 483 IPR019734 GO:0005515
Bva02g01456 623 MobiDBLite consensus disorder prediction 554 574 - -
Bva02g01456 623 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 68 571 - -
Bva02g01456 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 261 IPR001179 GO:0003755
Bva02g01456 623 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Bva02g01456 623 Gene3D Tetratricopeptide repeat domain 395 549 IPR011990 GO:0005515
Bva02g01456 623 SUPERFAMILY TPR-like 398 539 IPR011990 GO:0005515
Bva02g01456 623 MobiDBLite consensus disorder prediction 10 30 - -
Bva02g01456 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Bva02g01456 623 SUPERFAMILY FKBP-like 8 150 - -
Bva02g01456 623 Gene3D - 263 383 IPR046357 GO:0003755
Bva02g01456 623 MobiDBLite consensus disorder prediction 554 585 - -
Bva02g01456 623 SUPERFAMILY FKBP-like 266 389 - -
Bva02g01456 623 Gene3D - 2 149 IPR046357 GO:0003755
Bva02g01456 623 Gene3D - 150 262 IPR046357 GO:0003755
Bva02g01456 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Bva02g01456 623 SUPERFAMILY FKBP-like 152 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01456 Bva-Chr2 17866278 17874930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01456 34 549 Calmodulin-binding Proteins AT5G48570 30.418 1.06e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01456 - - gmx:100818201 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01456 02 17866278 17874930 Bva02g01456 02 17866278 17874930 ECH