Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01442 ATGGCGGAGGGTTTTGAGCCTTACCATGTTCCGCAGCAGAGTAGAAGAGATAAGCTCAGAGTTGTGGGTCAGAACCAACCGGGTCTTGTTGAGGGATGCGCAGGGTTACTCCCTCTGTACGATCCTTCTCTGATTTCATCCGATTTGCTAACATGCGCCAACCAAACTGGCCCCCACTTCCATAACCAGACTACTCCGCTTTCTGCTAATAAACCAGACCAAGGTTGTGCTGTGAAGGAGGAAGGCTCCGGTTTGATGGGATTTGCTCCAGGGGTTATCAatggttcttcttcttcttcatcttcgtCTTCGGTTTCGGTTTCGGTTTCTCACCACCAAGCTTATTTGGATCCTGAGTCGTCTTTGGCTATAAATCCGGGTTCAAGTACAATTCAAGTTATTGGCAATAATCCATTTCTCTATCCACCCCAAAACCTTCAGAATCTTAGAGAATTTAGTCAGAGCTACAATGGAAGTGAAGTAATGGTGTTCAAGCCAGAGACATTGTCGCTATCCCTTTCATCCCACAACACCCACCAACCCAATCTTCCTCTTGAGCTGAATCTTCAGCGATATGGGTCTGTGATTTACGGTGACAAGGTTGGTGATGGTGGTGGTTGTGTGGTTCCGGGTTTAGTTGGAGGCAGTGCTTCTGCCTCCAATGAAGTTTCCCGGACCCCCGTTCCCATGGGGCCATTCACGGGTTATGCTTCGATTCTTAAGGGATCCAGGTTCCTTAAACCAGCACAGCAGTTACTGGAAGAGCTCTGTGATATCGGGGTTCGTGGAATTCAAGCTGAAATGATTGCTCCAGATGCTTCTTTAATGGAACCTCCTCCCGAGAGTTTAAGCCAAAGTGGAATTGCAGATGACATGCTTGCTTCTGGAGATGGAGGTGAAGGGAAGAGGAAGAAGTCAAGGCTATTAACTATGCTTGATGAGATCTACAGGAGGTATAGGCAGTACTATCAACAGATGCATGCGGTGGTAACTTCTTTTGAGTATGTCGCGGGCCTTGGCAATGCAGCTCCCTATGCAAGCTTGGCTATCAAAACCATGTCAAAGCACTTCAGATGCTTGAAGAATGCTATCACTGACCAGCTTCAGTTGAACAATAAGGCTCCTCTTCACTTAATCAACAGGAAAGATGAACCTCCAAGGTTTGCCAACAATGACAGAGCCCCGTCTAGCCAAAGAACTCTTCACAACTCAGGATTTCTCGAGCACCAACCGGTTTGGCGACCTCAAAGAGGACTCCCAGAGCGTGCTGTAACTGTCCTAAGAGCATGGTTGTTCGAGCACTTTCTCCACCCCTATCCTACCGATACGGACAAGTTGATGTTGGCTAAACAAACTGGTCTGTCTCGTGGCCAGGTGTCAAATTGGTTTATTAATGCAAGAGTAAGGCTCTGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACACGCCAAGCTCAAAAAAGTTCGCAAAGGGAAGATCATAACAGAAACAGGTCAAATGATCATTTACTTTCAGAGAACACTATTCTTTCTGAGAATCCATCGACCTCCACCAATAAATTTCCAGATGCTCCCTATAAACGCACTAGAAATGAACTTCCTGATATGCCAGTGAGGACTCATGAACAACTGAGTCTGCCTTATACAACAAGCAACCAGCCAGTGGGTGTTGGTGTGAGCATGGGGAATGCAAGCAATGGTGTTTCACTTACACTGGGTCTACACCAAAATCATGGGATTGAATTGTCTGAACCCTTTCCCATGAATGCAGCTCAACGTTTCGGTCTTGCCCTTGAACCCAATAATGAGGGTTATGTTATGGCTGGTTTTGAATCTCAAGCTCGACATTTTGGTCGCGGCATGATTGGAGGGCAACTGTTGCATGATTTTGTTGGCTG 1901 0.4592 MAEGFEPYHVPQQSRRDKLRVVGQNQPGLVEGCAGLLPLYDPSLISSDLLTCANQTGPHFHNQTTPLSANKPDQGCAVKEEGSGLMGFAPGVINGSSSSSSSSSVSVSVSHHQAYLDPESSLAINPGSSTIQVIGNNPFLYPPQNLQNLREFSQSYNGSEVMVFKPETLSLSLSSHNTHQPNLPLELNLQRYGSVIYGDKVGDGGGCVVPGLVGGSASASNEVSRTPVPMGPFTGYASILKGSRFLKPAQQLLEELCDIGVRGIQAEMIAPDASLMEPPPESLSQSGIADDMLASGDGGEGKRKKSRLLTMLDEIYRRYRQYYQQMHAVVTSFEYVAGLGNAAPYASLAIKTMSKHFRCLKNAITDQLQLNNKAPLHLINRKDEPPRFANNDRAPSSQRTLHNSGFLEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRGQVSNWFINARVRLWKPMVEEIHMLETRQAQKSSQREDHNRNRSNDHLLSENTILSENPSTSTNKFPDAPYKRTRNELPDMPVRTHEQLSLPYTTSNQPVGVGVSMGNASNGVSLTLGLHQNHGIELSEPFPMNAAQRFGLALEPNNEGYVMAGFESQARHFGRGMIGGQLLHDFVG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01442 633 MobiDBLite consensus disorder prediction 483 502 - -
Bva02g01442 633 Pfam Associated with HOX 239 365 IPR006563 -
Bva02g01442 633 SMART HOX_1 413 477 IPR001356 GO:0003677
Bva02g01442 633 MobiDBLite consensus disorder prediction 274 303 - -
Bva02g01442 633 CDD homeodomain 413 474 IPR001356 GO:0003677
Bva02g01442 633 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 17 608 - -
Bva02g01442 633 MobiDBLite consensus disorder prediction 483 532 - -
Bva02g01442 633 MobiDBLite consensus disorder prediction 503 525 - -
Bva02g01442 633 MobiDBLite consensus disorder prediction 382 401 - -
Bva02g01442 633 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 17 608 - -
Bva02g01442 633 Gene3D - 416 478 - -
Bva02g01442 633 ProSiteProfiles 'Homeobox' domain profile. 410 473 IPR001356 GO:0003677
Bva02g01442 633 SMART prehox3 234 366 IPR006563 -
Bva02g01442 633 Pfam Homeobox KN domain 430 469 IPR008422 GO:0003677|GO:0006355
Bva02g01442 633 SUPERFAMILY Homeodomain-like 415 480 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01442 Bva-Chr2 17769156 17774714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01442 152 633 Homeobox Transcription Factor Family AT5G02030 48.242 1.46e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva02g01442 POX 2.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01442 - - pvy:116126263 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01442 02 17769156 17774714 Bva02g01442 02 17769156 17774714 ECH