Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01436 ATGCCATTGTCAAATCACATTGGTCCCTGGGAAAATACATCTGCTGGTGGTCTGAAAGTTCTTCGGGACAATAACCTTATACATCGAGATTTAAAGCCACAGAATCTTCTTCTCTCCCGAAATGATGACAAATCAGTATTGAAGATTGCAGATTTTGGATTTGCAGGATCTCTGCAGCCCAGAGGCCTTGCAGAAACCCTGTGTGGTTCACCACTTTACATGGCTCCAAAAATCATGCAACTGCAAAAATCTCTGGAGTGTTGGTGCAATTTTATTTCAGCTTGTTACAGGAAGAACACCTTTTACCGGAAACAATCAATACAGTTCTCCATGGATTGTGGATTTCGATTAACACAACGTGATCCACTGCGAAGGACTGAGGAAAATTCTCAAGAAGATTGCTTGCCTTTCTTTCTAGATGATGATTCAACTGGTCCTGAGGGGAGCCCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCTACCTCTGGATTTGATgttaagacaaaaatagataaagCAGATTCAGCATCCACTACTTCTAATAACAGAAATTTCACTTCTAGACATGATACTATGGCACACCAACCAGAAAACACCACTAACCTATGGAACAAAGATTGGCAAACACAAGGATTAAAAGTTGCAGATTCTCTAGAGAATATTGATCAAGATTATGTTCTTGTATCTGGACCCCCTGTAGATGTTTCATCTTCCTCGGTGAGTGCTTCAAAGCCTAGTCATTCTGCATACAAGTCAGGTGGTTCCCCCCAGGAGTCTTCTAATATAATCACTAGATTAAGTGCTCCAATGCCAATCGTTGGTGTAGCTACCGACACCACATATCAAATAGGAAGCTCAGAAAGTCAGGGAACTGCACCAGGAACTTCACAAGGATCAATGGATACAGCCGATGAGCAGCCATCGGCTGACTGCATGACAAGGATAAAATCATTGCAGCAGTGTGCATCCACCTTCATGGAATTAGTTAATGAAAAGGTAAAGGTAGCAATATGGAGGAGCAACAGTAAGAACCCTGGTAGTATTGATTCAGATGAATCCCTTGATGTAAACGCTCGAGGGCCCAAGgatattttatctcaaattgaAGGAAGTACAGAATGCCAGATGCAATGGAGACAATATTTCAGTCTGCCCTTCCTTTCGGGAGACATGGGGGTGGAAGAGCTCATGGACAATATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTGCGCTTGTTAAGCTTCCTTCTAGTCGAAGCTCCGTCGCTCATTCTGAACCCTCCATTTTCACTGACAAACACAGACCGTTACAGACTTCGGACATACATCGACGTTATTAATAATGGGCAAGTTTATTCGAGGTCTCAGCGAATGACGCTTCTGAAGTATACAAGGCGTTCTTA 1409 0.418 MPLSNHIGPWENTSAGGLKVLRDNNLIHRDLKPQNLLLSRNDDKSVLKIADFGFAGSLQPRGLAETLCGSPLYMAPKIMQLQKSLECWCNFISACYRKNTFYRKQSIQFSMDCGFRLTQRDPLRRTEENSQEDCLPFFLDDDSTGPEGSPSFSRKKSSMKSTSGFDVKTKIDKADSASTTSNNRNFTSRHDTMAHQPENTTNLWNKDWQTQGLKVADSLENIDQDYVLVSGPPVDVSSSSVSASKPSHSAYKSGGSPQESSNIITRLSAPMPIVGVATDTTYQIGSSESQGTAPGTSQGSMDTADEQPSADCMTRIKSLQQCASTFMELVNEKEVQNARCNGDNISVCPSFRETWGWKSSWTIWKVQLHCIQKLCAC 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01436 377 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 15 83 IPR045269 GO:0004674|GO:0006914
Bva02g01436 377 MobiDBLite consensus disorder prediction 137 164 - -
Bva02g01436 377 Gene3D Transferase(Phosphotransferase) domain 1 13 88 - -
Bva02g01436 377 SUPERFAMILY Protein kinase-like (PK-like) 16 81 IPR011009 -
Bva02g01436 377 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 192 334 IPR045269 GO:0004674|GO:0006914
Bva02g01436 377 MobiDBLite consensus disorder prediction 285 309 - -
Bva02g01436 377 MobiDBLite consensus disorder prediction 146 164 - -
Bva02g01436 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672|GO:0006468
Bva02g01436 377 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01436 377 Pfam Protein kinase domain 16 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01436 377 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 15 83 - -
Bva02g01436 377 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 192 334 - -
Bva02g01436 377 MobiDBLite consensus disorder prediction 234 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01436 Bva-Chr2 17738073 17741434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01436 11 88 EF-hand Containing Proteins AT4G04740 33.333 7.27e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Bva02g01436 Pkinase 1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01436 K08269 - gmx:100791596 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01436 02 17738073 17741434 Bva02g01436 02 17738073 17741434 ECH