Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01425 ATGAAATATCAGCAAAATCACGGGTCGAAGGTGGTGCCGTGCATTCTAAGCTGCCCCTCAAGTGTCAGCGAGTGTCTACTACTAACGAAGAAAATCACGCCAACTTCTCAGTTTTGTACTCAGGAAAGTTGGGGTTTGTGCTTTGTGGATTGTAAGATGAAGGCTCTTATTCTTGTCGGCGGTTTCGGAACACGGCTAAGGCCACTCACTCTCCATGTACCAAAGCCTCTGGTTGAATTTGCAAACAAACCCATGATTCTGCATCAGATTGAGGCTCTAAAAGCTATTGGAGTGACAGAAGTGATTTTGGCCATCAGTTACCAACCAGAGagtatgttaaattttttgaacgAGTATGAGAAGAAGCTTGAAATCAAGATCATTTGTTCCCAGGAGACGGAGCCACTAGGCACAGCAGGTCCTCTGGCTTTAGCCAGGGATAAATTGATAGATGGATCTGGTGAACCTTTCTTCGTGCTTAATAGCGACGTTATCTGCGAGTATCCACTACAAGAAATGATAGAATTCCACAAGAGCCATGGAGGGGAAGCTTCTATCATGGTTACCAAGGTGGATGAACCTTCCAAATATGGAGTGGTAGTTATGCAAGAAAATTCtggaaaagttgaaaaatttgTGGAGAAACCCAAGATGTTTGTCTCTAACAAGATCAATGCTGGAATCTATTTGTTGAATCCATCGGTACTTGATCGAATCAAGTTGAAACCGACGTCGATTGAGAAAGAGATCTTCCCAAAGATTGCAGCTGATGAACAGCTCTATGCCATGGTCTTGCCTGGCTTCTGGATGGACATTGGACAGCCTAAGGATTATATCACAGGTTTAAGACTGTACCTAGGTTCTCTGCAGAGGAAATCACCATCAAATCTAGCCACTGGTTCAAACATTGTTGGGAATGTTCTTGTAGAAGAGAGTGCGGTGGTTGGAGATGGCTGTCTTATTGGCCCAGATGTTGCCATTGGTCCTGGATGTGTCGTCGAATCCGGTGTCAGGCTGTCAAATTGCACCCTGATGCGCGGGGTTCGGATCAAGATGCATGCTTGCATCTCCAGTAGTATCATTGGATGGCACTCCACAGTTGGGAGATGGGCTAGGGTGGAAAACATGACAATCTTAGGAGAAGATGTCTATGTGCGAGACGAGGTTTATACCAACGGCGGCATTGTCCTGCCGCACAAGGAGATCAGCTTTAACATTTTGAAGCCAGAGATTGTCATGTG 1241 0.4424 MKYQQNHGSKVVPCILSCPSSVSECLLLTKKITPTSQFCTQESWGLCFVDCKMKALILVGGFGTRLRPLTLHVPKPLVEFANKPMILHQIEALKAIGVTEVILAISYQPESMLNFLNEYEKKLEIKIICSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVICEYPLQEMIEFHKSHGGEASIMVTKVDEPSKYGVVVMQENSGKVEKFVEKPKMFVSNKINAGIYLLNPSVLDRIKLKPTSIEKEIFPKIAADEQLYAMVLPGFWMDIGQPKDYITGLRLYLGSLQRKSPSNLATGSNIVGNVLVEESAVVGDGCLIGPDVAIGPGCVVESGVRLSNCTLMRGVRIKMHACISSSIIGWHSTVGRWARVENMTILGEDVYVRDEVYTNGGIVLPHKEISFNILKPEIVM 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01425 413 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 36 413 - -
Bva02g01425 413 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 36 413 - -
Bva02g01425 413 Pfam Nucleotidyl transferase 54 280 IPR005835 GO:0009058|GO:0016779
Bva02g01425 413 CDD M1P_guanylylT_B_like_N 53 286 IPR045233 GO:0004475|GO:0005525|GO:0009298
Bva02g01425 413 Pfam Bacterial transferase hexapeptide (six repeats) 312 345 IPR001451 -
Bva02g01425 413 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 52 283 IPR029044 -
Bva02g01425 413 Gene3D Hexapeptide repeat proteins 290 408 - -
Bva02g01425 413 SUPERFAMILY Nucleotide-diphospho-sugar transferases 52 364 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01425 Bva-Chr2 17678528 17682249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01425 52 199 Eukaryotic Initiation Factors Gene Family AT4G18300 23.077 4.46e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01425 K00966 - jre:109010025 639.802