Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01424 ATGGCCGTgctagtttcttttcttctctgttcTCACCGCACCATTTCAATGAAGAAACATACATTTACATCATTGATGTTCACAATTGTATTGCTGCTATCATCCGCAGCAGCTGTGCGGCATTGCGGTGACTGTGGCCGGAATCCGGTGCCGTACCCTTTAAGCACAGCACCGGACTGCGGTGACCCGTTGTACAAGTTACGGTGCACCGCAGGCACTCTATGGTTTGAAGCCCTTGGTGGCTCATCCTACATGATCAAGTTCATTAACCCAGCAACCCAGCGGATCATAATCCGACCCCCTACCCTTACCCGAAACTCTTGCGTGTCCTCAGATTTTCACAGTGAAGGTGTTCACTTGAATGAAACCCTCCCCTTTAACATCACCAACAGCAACACCGTCTTGCTCTTTAACTGTACCAATGCTCTGCACTTGCCAGCGCCCATGAACTGTTCCGAGAATAGCCTGTGCCACAGCTACATCAAGGACCATGCGGATGCAGCTGCGTGTAAGCGGGTGAAGTTGTGTTGCACGTTCAGGACGGGAGGGTCATACGCTGAGTATGTTAGTAGGGTTCATAATGGAGGGTGTGCTGCGTATCAGAGCTTTGTGGATCTTGATGTCACCGTGCCGCCACCGGCGAAGAAGTGGCCGGAGCCTGGGGTGGAGCTACAGTGGGTGCTACCCCATGAACCAATTTGCAAGGGGCCAATGGATTGCAAGGAATTGTTGAACTCCAAGTGTTTGGCGGATCCGGCGAGTGCTGGGCAGCAAAGGTGCTTCTGTGATTCTGGCTTCAAGTGGGATCCCATCAATGGATTGTGCCAAGATGTGAAGTGTGCAAAACATGGCAAAGGTAAAGGTTGCAAGGTTCGGAAGAAAAAGACAATGCTTATAGCCGCTGTAGCTGCTTCCTTAGGAGCAATAGTCTCTATTGCAATATTAGTTTGGATCCTCTTCAACAAGAAGCATAATCAATTGAACAAACAAGAGCAAAAGAATGCTATGAAGCGAAGAGAACAGATCCTAAGCGCCAAAGCAAGCGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGTTGTTGGAGCTTCTGACTTGTGAGAAGGCTATTGATTTCAATAGGGAAGAGGAAGATGTGAACTTGGTGGTTTATGCCAAGAAGGTTATGAGTCAAGAGAGATTGATGGATATTGTTGATCCATTGCTGAAAGAAGGAGCTAGCAACTTGGCATTGGGGACAATGAAATCATTGGGTTATCTTGCAGCTGCATGCTTGAATGAACAGAGGCAAAATCGGCCATCAATGAAAGAAGTTTCTGATGAGATTGAATACTTGATTAGTATTGTGTCACATGAGATTTCCAAGACATA 1370 0.4657 MAVLVSFLLCSHRTISMKKHTFTSLMFTIVLLLSSAAAVRHCGDCGRNPVPYPLSTAPDCGDPLYKLRCTAGTLWFEALGGSSYMIKFINPATQRIIIRPPTLTRNSCVSSDFHSEGVHLNETLPFNITNSNTVLLFNCTNALHLPAPMNCSENSLCHSYIKDHADAAACKRVKLCCTFRTGGSYAEYVSRVHNGGCAAYQSFVDLDVTVPPPAKKWPEPGVELQWVLPHEPICKGPMDCKELLNSKCLADPASAGQQRCFCDSGFKWDPINGLCQDVKCAKHGKGKGCKVRKKKTMLIAAVAASLGAIVSIAILVWILFNKKHNQLNKQEQKNAMKRREQILSAKASDKSDVYSFGVVLLELLTCEKAIDFNREEEDVNLVVYAKKVMSQERLMDIVDPLLKEGASNLALGTMKSLGYLAAACLNEQRQNRPSMKEVSDEIEYLISIVSHEISKT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01424 456 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 348 451 - -
Bva02g01424 456 SUPERFAMILY Protein kinase-like (PK-like) 340 440 IPR011009 -
Bva02g01424 456 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 31 348 - -
Bva02g01424 456 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 348 451 IPR045274 GO:0007166
Bva02g01424 456 Pfam Protein tyrosine and serine/threonine kinase 339 441 IPR001245 GO:0004672|GO:0006468
Bva02g01424 456 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 348 IPR045274 GO:0007166
Bva02g01424 456 Gene3D Transferase(Phosphotransferase) domain 1 319 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01424 Bva-Chr2 17673487 17676099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01424 348 456 Receptor kinase-like Gene Family AT5G02070 66.055 9.56e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva02g01424 PK_Tyr_Ser-Thr 1.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01424 - - aprc:113862410 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01424 02 17673487 17676099 Bva02g01424 02 17673487 17676099 ECH