Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01423 ATGGCTGTAGCTTCACTATCTTGCTCTTCATTCGTCAATGCCCTCAAGCATTGCCCAAACTGTGGCCACACGCCAGTGCCATATCCACTGAGCACAGGTCCAGATTGTGGCGACCAATCCTACAAGGTACAATGCAACGCAGGCACCCTCTGGTTCAATGCACTCAATCAATCCTCCTATCAGATCATCTCCATCAACCCCACAACGCAGCGTTTGACTATTCGCTTACCTGGTTTTGCTAAGAGCACATGCATGTCAGCTGATTTTCAAAGCACTGGATTGATCCTAGACCCTAACTTGCCCTTCAATATCACTTCCAACAATCAGGTGGTGTACATGAATTGTACTAATAAGGTTTCTGATTCTTGGAATTGCACTGCATCAAGCATTTGCCATGACTATATTAGGGACAATGCTGCTGTTGCCAAGGCTTGCGGGCCATCTAGCCATGCCTCCAAGATATGTTGCTCTATAAAGACTGGTGGGTCTTCAACAGCTTATCATATTAAGGTTAGGAAGGAACGGTGTTCGGCTTATGAAAGTTTTGTGAATTTGGACATTTCGTTGCCGGTGAAGAAGTGGCCGGAGCCGGCGGTGGAGCTGCAGTGGCTGTTGCCAATGGAGCCTGTGTGCAAGGTAGCCAAGGATTGTGCGGATCAGACGAATTCGGCGTGTTTGGTGGACCCTAGCGGAGTTAGGAGGTGTTTATGCAAGACTGGATTTCGGTGGGATCCTATAAACGCTACATGTCAAAGCATGGCGTTTTCCGGGGCTGCCATGCTAACCGGAACCTTACTCGCTGCATTGGCATTTTTTCTTCGGTGGCAGCGCAAGAAGAGAGCAGCCGACCTGAGCATGAGCAGAGCACGTGAACTGATCTCAGACAACAGCGGGAAATCAGCCAAGATCTTCACAAGCAAAGAGGTCACAAAAGCAACCAACAATTTCTCCAAGGACAACCTCCTCGGCGTCGGCGGCTTCGGCGAAGTCTTCAAAGGCGTTCTCGAGGACGGAACCGTCACGGCCATCAAGCGAGCCAAGCACGGTTGCACCAGAGGCATAGACCAAATAGTCAACGAGGTCCGAATCCTCTGTCAAGTCAACCACAGGAGCCTCGTACGGCTCCTAGGTTGTTGTGTTGAACTTCAAGAACCTCTTCTCATCTACGAGTATGTCCCAAATGGTACCCTCTTTGATCACCTCCATAACCGTAATTCCAAAAAAAGGGCCCCACTCAGGTGGCATGAACGGCTACGAATTGCCCATCAAACAGCTGAAGGGCTTGCTTATCTTCACACCTCAGCTATACCCAAAATCTACCATAGAGATGTAAAGTCAAGCAACATTCTTTTGGACGATGAGCTTAATGTTAAGGTTTCTGATTTTGGGCTCTCAAGGTTGGCAGCCAGTGAGGCAAGCCATATAACCACGTGTGCTCAAGGGACTCTAGGCTATCTTGATCCAgactattatattaattttcagcTTACAGATAAAAGTGACGTGTACAGTTTTGGGGTGGTTTTATTGGAGCTTTTGACTTCGAAGAAAGCTATTGATTTTAATAGAGAGGAGGAGGATGTGAACTTGGTGGTGTTTGCGAAGAGGGCTGCGAAAGAAGGGAGGTTAATGGATGTTATTGATCCAGGGTTGAAAATGGGAGCTAGAAAGTTGGAGTTGGAGAGTATGAAAGCGTTGGGATATCTAGCTACGTCGTGCTTGGATGATAGGAGGCAAAATAGGCCTCCAATGAAGGACGTTGATGATGAGATTGAGTATATTACTAATATTATTGTTGCTGGTACTACCAAGAGTGAGGCTTCAGAGGTTTG 1832 0.4711 MAVASLSCSSFVNALKHCPNCGHTPVPYPLSTGPDCGDQSYKVQCNAGTLWFNALNQSSYQIISINPTTQRLTIRLPGFAKSTCMSADFQSTGLILDPNLPFNITSNNQVVYMNCTNKVSDSWNCTASSICHDYIRDNAAVAKACGPSSHASKICCSIKTGGSSTAYHIKVRKERCSAYESFVNLDISLPVKKWPEPAVELQWLLPMEPVCKVAKDCADQTNSACLVDPSGVRRCLCKTGFRWDPINATCQSMAFSGAAMLTGTLLAALAFFLRWQRKKRAADLSMSRARELISDNSGKSAKIFTSKEVTKATNNFSKDNLLGVGGFGEVFKGVLEDGTVTAIKRAKHGCTRGIDQIVNEVRILCQVNHRSLVRLLGCCVELQEPLLIYEYVPNGTLFDHLHNRNSKKRAPLRWHERLRIAHQTAEGLAYLHTSAIPKIYHRDVKSSNILLDDELNVKVSDFGLSRLAASEASHITTCAQGTLGYLDPDYYINFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEEDVNLVVFAKRAAKEGRLMDVIDPGLKMGARKLELESMKALGYLATSCLDDRRQNRPPMKDVDDEIEYITNIIVAGTTKSEASEV 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01423 610 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 597 IPR045274 GO:0007166
Bva02g01423 610 SMART serkin_6 316 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01423 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Bva02g01423 610 Gene3D Transferase(Phosphotransferase) domain 1 392 605 - -
Bva02g01423 610 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 17 597 - -
Bva02g01423 610 CDD STKc_IRAK 322 592 - -
Bva02g01423 610 Gene3D Phosphorylase Kinase; domain 1 277 391 - -
Bva02g01423 610 Pfam Protein tyrosine and serine/threonine kinase 319 588 IPR001245 GO:0004672|GO:0006468
Bva02g01423 610 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bva02g01423 610 ProSiteProfiles Protein kinase domain profile. 316 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01423 610 SUPERFAMILY Protein kinase-like (PK-like) 297 589 IPR011009 -
Bva02g01423 610 Pfam Wall-associated receptor kinase galacturonan-binding 18 74 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01423 Bva-Chr2 17669556 17669759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01423 1 605 Receptor kinase-like Gene Family AT5G02070 54.264 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva02g01423 PK_Tyr_Ser-Thr 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01423 - - gmx:100775709 776.548