Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01418 ATGGAACAGGGTCAATGTCGGATGTGGGCAAAGAGGAAGTATTCTATGACCTCTAATCTTACTTCAACAACCAACCCTTCTTATGACGATTCCTGGGAAGAACAAGCCTTTGCAGAAGATGCATCTGGAGCTATGGGAGGCTGCACGTGGCCACCAAGATCATATTCTTGCAGTTTTTGCCGGCGAGAGTTCCGGTCAGCGCAGGCGCTAGGTGGCCATATGAATGTTCATAGAAGGGATAGAGCAAGATTAAAGCAGCCTTCAAGTCCTCCAAATGAAATTCTATATCCTGACCTTGAAACCCCTCATCAAAATCCTGTGCAGAATCCTTTTACATCTAGTCCGGGTTATTTATACCCAAGTTCTGTTTGTGGATTGGCTTATAACACTAACCCTAATTCTAATCCTGCTGTTCCTGCTTCCTCGTCCTCTCCCTCACCTTCTAAAGCTTTAGCTCCAACAATTAATGAGAATTGCAGTGAGGAATATTCCCTGATCCAACCTTTCACTTCTTCTATTCTCCAAAGAGTACACCACAAGGCTTCCCCTGTCAATTCCTCTAAATCATGGTCAAACTTTGCTGAAGACAGAAATTTACAGAAGTTTGATATTGATCCTGAATCAATAAATGAGAAGGTCTCAGAAATAGCAGATTCTGGGTGTAGGTCTAAGCTGGATAATGATAGAAGTGATGTTGCAGTGAGCTTGAATTTGGTTGTCTGTAGAGCTTCTGTCCCATCTGTggagtttgagactaacaaggAAGAAGCTACCAGTTGCAAGAGGAGAAGATTAACAGATGCTTCATCAGTTCCTTTCTtcacaaaatcaaattctatCGATAGACGTCATCTTCAGTCAAAGATGCTTGATACTAGCCCTAGCTCCATAGAAGAGCTAGATCTGGAACTGAGGCTTGGTCACAGGCCCAAGGTATA 938 0.4158 MEQGQCRMWAKRKYSMTSNLTSTTNPSYDDSWEEQAFAEDASGAMGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPPNEILYPDLETPHQNPVQNPFTSSPGYLYPSSVCGLAYNTNPNSNPAVPASSSSPSPSKALAPTINENCSEEYSLIQPFTSSILQRVHHKASPVNSSKSWSNFAEDRNLQKFDIDPESINEKVSEIADSGCRSKLDNDRSDVAVSLNLVVCRASVPSVEFETNKEEATSCKRRRLTDASSVPFFTKSNSIDRRHLQSKMLDTSPSSIEELDLELRLGHRPKV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01418 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Bva02g01418 312 PANTHER OS07G0101800 PROTEIN 1 311 - -
Bva02g01418 312 Gene3D Classic Zinc Finger 48 95 - -
Bva02g01418 312 MobiDBLite consensus disorder prediction 75 112 - -
Bva02g01418 312 SUPERFAMILY beta-beta-alpha zinc fingers 52 81 IPR036236 -
Bva02g01418 312 SMART c2h2final6 55 77 IPR013087 -
Bva02g01418 312 Pfam C2H2-type zinc finger 55 79 - -
Bva02g01418 312 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Bva02g01418 312 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01418 Bva-Chr2 17623853 17624791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01418 1 91 C2H2 Transcription Factor Family AT5G06070 57.732 6.16e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva02g01418 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01418 - - gmx:100801427 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01418 02 17623853 17624791 Bva12g02384 12 18065192 18066043 ECH
Bva02g01418 02 17623853 17624791 Bva02g01418 02 17623853 17624791 ECH