Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01411 atgGCCAACAACAACCTCAGCTTTCTCAAATTGTTCTCTCTATTGCTGTCCCTTCTCATCCCAGCTTCTTCTCGGCTTGATGAGCTCTTTTTTGCTGGATTTAATGATGTGGGTTCCAATTTAACCTTGAATGGAATAGCAGAAATCCAGAAAAATGGAATCTTGAAATTGACAAACGAGACAAGCAGGTTAATGGGTCATGCTTTCTGTGCTACCCCTTTTCAATTTAAGAACTCCACCGATGGTAAAGCTTTCTCCTTTTCCACCTCTTTTGCTCTGGCTATTGTCCCTGAGTATCCTAAGCTTGGTGGGCATGGTATGGCTTTCACAATAGCAACTTCCAAGAATCTCAAAGCTCTACCAAGCCAATACCTTGGTCTCCTCAACGCCAGCGATGTTGGCAACTTCTCCAACCACCTATTCGCTGTCGAATTCGACACCGTCCAAGATTTCGAGTTTGGGGATATTAATGATAACCATGTCGGAATCGACATCAATAGCTTGGTATCCAATGCTTCAGCTGCTGCAAGTTACTTCACTGATGATTCAACACAGAAAGACTTGAACTTGAAAGGTGGGAAAGCGATTCTAGCTTGGATTGATTACGATTCAGCTCAAAATCTCATGAGTGTCACACTTTCTCCAACTTCTTCCAAACCCAAAAAGCCAATCTTGACATTCTCTTTAGATCTCTCGCCAATTCTGAATGAATCTATGTATGTTGGGTTTTCTGCTTCAACGGGTTTGCTAGCAAGTTCCCATTACATCTTGGGTTGgagtttcaaaatcaatggACCAGCTCCacccctttctctctcttctcttccttcacttccaaagcaaaagaagaagaacactTCTCTGGTTCTGGGAGTTTCGCTCTTAATGGTTATTATAATGCTATCTGCTATCCTGGTTGGCCTTTACGTGTTCAGAAAAATCAAGAACGCTGATATTATAGAAGCTTGGGAGCTAGAAGTTGGGCCACACCGTTACTCCTACAAAGAGCTCAAGAAAGCTACCAGGGGCTTCAAGGACAAAGAGCTACTGGGGCAAGGCGGGTTTGGCAGAGTTTACAAAGGAACACTCCCGAGTTCCAAGACCCCAGTTGCTGTGAAGCGAGTTTCACACGAATCCAAACAGGGTCTAAGAGAATTTATATCAGAAATTGCAAGCATAGGCCGTTTGCGCCATAGGAACTTGGTTCAGTTACTGGGTTGGTGTCGCCGCCGAGGGGATTTGCTTCTTGTCTATGATTTCATGGCTAATGGTAGCTTAGACAAGTATCTGTTTGATGAgccaaaaattattctaagttGGGAACAGAGGTTCAAGATCATAAAAGGTGTGGCTTCAGCACTTGTCTATCTCCACGAAGGCTACGAGCAGATTGTGATTCACAGGGATGTGAAGGCCAGCAATGTGCTGCTAGACTGTGAACTCAATGGAAGATTAGGTGATTTTGGCTTAGCCAGATTATATGAACACGGGGCTAATCCAAGTACCACAAGAGTGGTGGGCACTTTGGGTTACTTGGCACCAGAACTACCAAGAACAGGAAAGGCCACGACAAGTTCTGATGTGTTTGCATTTGGTGCACTCTTGCTTGAGGTGGTGTGTGGAAGAAGACCCATTGAACCAAAGGCAATGCCAGAGGAACTGGTCTTGGTGGATTGGGTTTGGGAGAGGTACAGAGAAGGGAGGGTGCTTGATGTTGTGGACCCAAAATTGAATGGGGATTTTGATGAGAGTGAGGTGATAACGGTGGTGAAATTAGGGTTAATGTGCTCGAATGATGTGCCTTCTGCTAGGCCAGGCATGAGACAGATTGTGAGATATTTAGATGGCGAAGTTGGGGTGCCAGAGGATGTGAGGAAGCCTGGGGAGATACCTCAGCGAGAGGGGTTTGATGAATTCTTGCACTCACTTGCATCTTCTTCATTTGATAAGATGAGTTCTAGCTCTTTGATGGGACATAGGGAATTTGATAccacttttccttcttttgccACTTCACCTCTTTCCCTTCTCAATGCTAGAGGGGAAACAAGGTG 2054 0.4255 MANNNLSFLKLFSLLLSLLIPASSRLDELFFAGFNDVGSNLTLNGIAEIQKNGILKLTNETSRLMGHAFCATPFQFKNSTDGKAFSFSTSFALAIVPEYPKLGGHGMAFTIATSKNLKALPSQYLGLLNASDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINSLVSNASAAASYFTDDSTQKDLNLKGGKAILAWIDYDSAQNLMSVTLSPTSSKPKKPILTFSLDLSPILNESMYVGFSASTGLLASSHYILGWSFKINGPAPPLSLSSLPSLPKQKKKNTSLVLGVSLLMVIIMLSAILVGLYVFRKIKNADIIEAWELEVGPHRYSYKELKKATRGFKDKELLGQGGFGRVYKGTLPSSKTPVAVKRVSHESKQGLREFISEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPKIILSWEQRFKIIKGVASALVYLHEGYEQIVIHRDVKASNVLLDCELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVFAFGALLLEVVCGRRPIEPKAMPEELVLVDWVWERYREGRVLDVVDPKLNGDFDESEVITVVKLGLMCSNDVPSARPGMRQIVRYLDGEVGVPEDVRKPGEIPQREGFDEFLHSLASSSFDKMSSSSLMGHREFDTTFPSFATSPLSLLNARGETR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01411 684 PANTHER - 11 659 - -
Bva02g01411 684 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Bva02g01411 684 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Bva02g01411 684 Gene3D - 29 270 - -
Bva02g01411 684 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Bva02g01411 684 ProSiteProfiles Protein kinase domain profile. 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01411 684 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01411 684 Pfam Protein kinase domain 344 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01411 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bva02g01411 684 SUPERFAMILY Protein kinase-like (PK-like) 326 635 IPR011009 -
Bva02g01411 684 CDD lectin_legume_LecRK_Arcelin_ConA 31 265 IPR001220 GO:0030246
Bva02g01411 684 CDD STKc_IRAK 350 616 - -
Bva02g01411 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 11 659 - -
Bva02g01411 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 282 IPR013320 -
Bva02g01411 684 Pfam Legume lectin domain 30 275 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01411 Bva-Chr2 17578672 17581112 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01411 22 655 Receptor kinase-like Gene Family AT3G55550 61.778 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva02g01411 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01411 - - gmx:100784346 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01411 02 17578672 17581112 Bva12g02396 12 18134375 18136808 ECH
Bva02g01411 02 17578672 17581112 Bva02g01411 02 17578672 17581112 ECH