Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01408 ATGTCTACCAAGCTTGCAGTGATTATTATCTCTTTGCTGGTGAAATTGGCAATTAGTGGAGATACCAGTTTCATCTATAATGGCTTCCAATCTGCAAATTTAGCCCTTGATGGAATTGCTGAGATAACCTCCAATGGCTTACTTGAGCTCACCAATGGCACCAAGCAACAAAAGGGTCATGCTTTTTATCCAAACCCAGTAGTTTTCAAGACCTCTTCAAATTccaacttttcttctttctctacttcatttgtttttgcCATTAGATCTGAGTATCCCACTCTGAGTGGCCATGGAATAGCTTTTGTGATTACTCCCACAAGAGGGCTTCCCTTTTCTCTGCCAAGCCAATACCTTGGCCTCTTTAATGAGACCAACAATGGCAATGACACGAACCGGGTTTTCGCCGTGGAACTGGACACCATTATGAGCAGTGAATTTGGAGATATCAATGATAACCATGCTGGAATTGACATCAATGGCTTGAAATCAGTCAAATCTGAGCCTGCAGGGTATTATAGCGATGGTGGGTTTCAGAATTTGAGTCTCATAAGTGGCTATGAAATGAAGGTTTGGGTGGAATATGATGGAACCAAGAAGCAAATCGATGTTACTTTAGCTCCAATCAACGTTGAAAAACCAGAAACTCCATTGTTGTCATTGACCAGAGATCTTTCTCCTTATTTAAACAGTACCATGTATGTTGGGTTCTCATCATCTACTGGCTCTGTTCTAACTTCCCATTATATTCTGGGTTGGAGCTTCAGAGTGAATGGCAAGGAACAAGAGCTTGTAATCTCTAAACTCCCAAAGCTGCCAAGAttaggagaaaaagaagagcctaaaattttcacaattgGGTTGCCAATGATTTCTGTCagcttatttttcttggtaatCTTAACTGTGCTTCATGTcatgaaaaggaagaagaaatttgcAGAATTGGTTGAAGATTGGGAGCTAGACTATGGTCCTCACAGATTCAAATACAAAGATCTTTACTTTTCCACAAAGGGTTTCAGAGAAAAGGAGTTGCTGGGCACTGGTGGATTTGGCAGAGTCTACAAAGGGATAATGCCAATTTCAAAGCTTGAAGTTGCAGTGAAGAGAGTCTCCCATGAATCCAGACAAGGGATGAAGGAATTTGTAGCAGAAATCGTCAGCATTGGCAGGCTTCGCCACAGGAATCTAGTTCCCCTTCTGGGCTATTGCAGGCGCAAAGGAGAGCTTCTTCTGGTCTATGATTACATGCCAAATGGGAGCTTAGACAAATATCTATACAACAATCCAAGAGTGACCCTTAGTTGGAACCAAAGATTCAGAATCATCAAAGGGGTAGCTTCAGCTCTGTTTTATCTACACGAAGAATGGGACCAAGTTGTGATCCACAGAGACATAAAGGCCAGCAATGTGCTGCTAGATGCAGAATTGAATGGCAGATTAGGGGACTTTGGTCTTGCAAGATTATATGACCATGGAACTGATCCTCAAACTACACATGTAGTGGGAACTCTAGGCTATCTGGCACCGGAGCATACGCGAACCGGGAGGGCAACCACGAGCTCTGATGTGTATGCTTTTGGTGCATTTCTGCTAGAGGTTGCTTGTGGAAGAAGGCCAATAGAGCAAGGAGAAAATGGGGGTGAAATCTTGGTGGATTTTGTGTATTGCTGCTGGAAGAGGGGAGATATTCTTGAGGCAAAGGATGTAAATTTGGGAGCAGATTATAGAGCAGATGAGGTGGAGTTGGTGTTGAAACTGGGCTTGTTTTGTTCTCATTCTGACCCTGTGATTAGGCCAAAGATGAGGCAAGTTCTGCACTACTTGCAGAGGGATATGCCTATGCCTGATCTGTCTTTGCTTTGCTTATCTTCTTCTGGTTTAACTTTCGGTCACCGTGAAGAGTTAGATGATTTTGTTCCAATGTCATATCCTTCTACTGAGAGGGATTTCTCTCATGCTTCTTCTGTGGCTGAATCTCTTCTCTCCGGAGGCAGATG 2003 0.4094 MSTKLAVIIISLLVKLAISGDTSFIYNGFQSANLALDGIAEITSNGLLELTNGTKQQKGHAFYPNPVVFKTSSNSNFSSFSTSFVFAIRSEYPTLSGHGIAFVITPTRGLPFSLPSQYLGLFNETNNGNDTNRVFAVELDTIMSSEFGDINDNHAGIDINGLKSVKSEPAGYYSDGGFQNLSLISGYEMKVWVEYDGTKKQIDVTLAPINVEKPETPLLSLTRDLSPYLNSTMYVGFSSSTGSVLTSHYILGWSFRVNGKEQELVISKLPKLPRLGEKEEPKIFTIGLPMISVSLFFLVILTVLHVMKRKKKFAELVEDWELDYGPHRFKYKDLYFSTKGFREKELLGTGGFGRVYKGIMPISKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNNPRVTLSWNQRFRIIKGVASALFYLHEEWDQVVIHRDIKASNVLLDAELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHTRTGRATTSSDVYAFGAFLLEVACGRRPIEQGENGGEILVDFVYCCWKRGDILEAKDVNLGADYRADEVELVLKLGLFCSHSDPVIRPKMRQVLHYLQRDMPMPDLSLLCLSSSGLTFGHREELDDFVPMSYPSTERDFSHASSVAESLLSGGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01408 667 CDD lectin_legume_LecRK_Arcelin_ConA 22 259 IPR001220 GO:0030246
Bva02g01408 667 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Bva02g01408 667 CDD STKc_IRAK 347 612 - -
Bva02g01408 667 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 7 645 - -
Bva02g01408 667 SMART serkin_6 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01408 667 Pfam Protein kinase domain 341 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01408 667 Pfam Legume lectin domain 22 270 IPR001220 GO:0030246
Bva02g01408 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 277 IPR013320 -
Bva02g01408 667 PANTHER - 7 645 - -
Bva02g01408 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Bva02g01408 667 Gene3D Transferase(Phosphotransferase) domain 1 418 616 - -
Bva02g01408 667 Gene3D - 20 270 - -
Bva02g01408 667 SUPERFAMILY Protein kinase-like (PK-like) 322 623 IPR011009 -
Bva02g01408 667 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Bva02g01408 667 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01408 Bva-Chr2 17563397 17565634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01408 14 667 Receptor kinase-like Gene Family AT3G53810 62.784 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva02g01408 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01408 - - gmx:100783815 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01408 02 17563397 17565634 Bva02g01408 02 17563397 17565634 ECH