Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01381 ATGCTGGAAGGCAATGTGCCAAGAAAAGGCGTGTTTAAGAATGCAAGTGCATTATCACTAATTGGGAATAGCAGGCTTTGTGGGGGTATCTCAGAGCTGCAGCTACCACCATGCCCCGTCAAAGTTACAAAGGAACATCACAATTGGAAGCTGATAATAGTAACAACTTGTGTGGTTGTTTTTCTGCTTTCTTTGTCATCTGTTCTTGCTATCTATTTGGTgcgaaaaaggaagaaatcatCCTCAACTTCTGCAGTTGACCAGGCTTCTAAGGTGTCATATCAATGCCTGCAACATGCAACTGAGGGGTTTTCAGCCAATAACTTGATAGGGTTTGGAAGCTTTGGCACTGTGTATAAAGCAAATCTAGAGCCCGAATATGGAGTTGTTGCTGTAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCACACTAGTTTCATTGCCGAATGTAATGCAATCAGAAACATCAGGCATCGGAATCtggttaaaattttgacatgtTGCTCCAGCACAGATTACAAAGGCGAAGAATTTAAGGCTCTTGTTTTTGAGTACATGGCAAATGGAAGCCTAGAAAAATGGTTGCATCCAAGTATAGAAAGTACCAATCAACCAAGAACTTTGAGCCTCGTTCAAAgagtaaatattattactaATGTTTCTTCTGCATTACATTATCTCCACAATGAATGTGAGCAGCCTGTTATTCATTGTGATTTAAAGCCAGAAAATGTCCTTCTTGATCATGACATGGTGGCTCATGTGGGAGATTTCGGATTAGCAAGAATTCTCTCAACAATTAATGGCATCTCTCATATGCAAGTCAGCTCAATTGGAATTAAGGGGACAATTGGTTATGCTCCTCCAGAGTGTGGCATGGGTTCTGATGTGTCAACACAAGGAGATGTTTACAGCTTTGAAATTCTTGTGTTGGAGATGTTAACTGGAAGAAGACCGACGGAGGATATGTTCAAAGAAGGCGAAAATCTCCATGTCTATGTTAAAACTGCATATCCAGATAACCTTGTGCAGATTGTGGATCCAGCTATTTTCCATGGAGATTTACAACTGATAGCAACagcagcagaagcagaagaaagAGACAGGAGGGAGAACCCGATTCGTATGCCTCCTAATGTAAAGGAGTGCTTAGTTTCACTGTTTAGGATTGGACTTGATTGTTCGGTGGAAtcacaaaaagagagaatgagtATGGCGAATGTCACCAGAGAGCTAAATGTTATCAGAAGTTCCTTTCCTGCTATTGGTGGAGGGAAGAACGGAGGCTG 1289 0.3879 MLEGNVPRKGVFKNASALSLIGNSRLCGGISELQLPPCPVKVTKEHHNWKLIIVTTCVVVFLLSLSSVLAIYLVRKRKKSSSTSAVDQASKVSYQCLQHATEGFSANNLIGFGSFGTVYKANLEPEYGVVAVKVLNLQKKGAHTSFIAECNAIRNIRHRNLVKILTCCSSTDYKGEEFKALVFEYMANGSLEKWLHPSIESTNQPRTLSLVQRVNIITNVSSALHYLHNECEQPVIHCDLKPENVLLDHDMVAHVGDFGLARILSTINGISHMQVSSIGIKGTIGYAPPECGMGSDVSTQGDVYSFEILVLEMLTGRRPTEDMFKEGENLHVYVKTAYPDNLVQIVDPAIFHGDLQLIATAAEAEERDRRENPIRMPPNVKECLVSLFRIGLDCSVESQKERMSMANVTRELNVIRSSFPAIGGGKNGG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01381 429 SUPERFAMILY Protein kinase-like (PK-like) 79 412 IPR011009 -
Bva02g01381 429 Pfam Protein kinase domain 106 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01381 429 Gene3D Transferase(Phosphotransferase) domain 1 186 420 - -
Bva02g01381 429 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 421 - -
Bva02g01381 429 SMART serkin_6 104 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01381 429 Gene3D Phosphorylase Kinase; domain 1 66 185 - -
Bva02g01381 429 ProSiteProfiles Protein kinase domain profile. 104 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01381 429 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Bva02g01381 429 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 421 - -
Bva02g01381 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01381 Bva-Chr2 17434981 17436539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01381 2 419 Receptor kinase-like Gene Family AT3G47570 47.696 8.96e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva02g01381 Pkinase 8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01381 - - ccaj:109792361 510.76