Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01379 ATGAAACCTTTTGCCGCTATGTTACCTGAAATTTCAGTATGGTCCATATACCTTAAACTGatccttctcttttattatgtGAGCTTACTGGGGTCTCAACCTAGCAGAGTTGTGTCTGCATTAGGAAATGAGACTGATTATTTGGCTTTGCTCAAGTTCAAAGAATCAATATCCAATTACCCTTCTGAAATCCTGGCCTCTTGGAATAGCTCAACCCACTTTTGCAATTGGCACGGCATCACATGCAGCCACCGGCGTCAAAGAGTTGTTGAGTTAAATCTACAAAGCTATGAATTGCTTGGATTCATATCACCTCATGTTGGGAACCTTTCCTTTTTGAGAAGCATTGTTCTTGACAACAACCGattaaaaggagaaatccCACAAGAATTGGGTCGTTTATTCCGACTACAACAACTCTCTCTCGCTAATAACACATTGTCAGGGAAAATTCCTACCAACTTGACAAGTTGCTCAAAACTAAGGCTCTTAGATTTGTGGAGAAATGCTTTTGTTGGCAAAATACCAACTGAGTTTTGCTCTCTTAGGAAGCTTGAAGAGTTGAGTATTGATGTTAACAATCTAACAGGAAAAATCCCAAATTCCATTGGGAATCTTTCTTCTCTTACAACTTTTTGGGCCGGTTATAATAACTTGGAGGGCAACATACCAGATGATATAAGCCATTTGAGAAACCTGACACTTATAGCAGTATTTGGCAACAACTTTTTCGGATCAATTCCAGAAAGTTTGCAAGAAATTTCTGTTCTAAATCACTTGAATGTTTCCTTTAACATGTTGGATGGCAAGGTGCCAATAGAAGGTGTGTTTAAGAATGCAAGTGCATTATCACTAATTGGGAATAGCAGGCTTTGTGGGGGTATCTCAGAGCTGCAGCTACCACCATGCCCCGTCAAAGTTACAAAGAAACATCACAATTTTAAGCTGATAATAGCAATAACTTGTGtggttatttttcttcttttgttgtcaTCTATTCTTGCTATCTATTTGGTgcgaaaaaggaagaaatcatCCTCAACTTCTGCAGTTGAGCAGGCTTCTAAGGTGTCATATCAATGCCTGCAACATGCAACTGAAGGATTTTCAGCCAATAACTTGATAGGGTCTGGAAGCTTTGGCACAGTGTATAAAGCAAATCTAGAGCCAGAATATGGAGTTGTTGCTGTAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCACACTAGCTTCATTGCCGAATGTAATGCACTCAGAAACATCAGGCATCGGAATCtggttaaaattttgacatgtTGCTCCAGCACAGATTACAAAGGCAAAGAATTTAAGGCTCTTGTTTTTGAGTACATGGCAAATGGAAGCCTAGAAAAATGGTTGCATCCAGGTATAGAAAGTACCAATCAACCAAGAACTTTGAGCCTTGTTCAAAgagtaaatattattactaATGTTTCTTCTGCATTACATTATCTCCACAATGAATGTGAGCAGCCTGTTATTCATTGTGATTTAAAGCCAGAAAATGTCCTCCTTGATCATGACATGGTTGCTCATGTGGGAGATTTTGGATTAGCAAGAATTCTCTCAACAATTAATGGCATCTCTCATATGCAAGTCAGCTCAATTGGAATTAAGGGGACAATTGGTTATGCTCCTCCAGAGTGTGGCATGGGTTCTGATGTGTCAACACAAGgagatgtttatagttttggaatTCTTGTGTTGGAGATGTTAACTGGAAGAAGACCGACGGAGGATATGTTCAAAGAAGGCGAAAATCTCCATGGCTATGTTAAAAATGCATATCTAGATAACCTTGTGCAGATTGTGGATCCAGCTATTTTCCATGGAGAATTAAAACTGGTAGCAATagcagcagaagcagaagaaagAGATAGGAGGGAGAACCCGATTTGTATGCCTCCTAATGTAAGGGACAGCTTAGTTTCACTGTTTAGGATTGGACTTGATTGTTCGGTGGAATCAccaaaagagagaatgagTATGGCGAATGTCATCAAAGAGCTAAATCTTATCAGAAGTTCCTCTCCTGCTGCTGGTGGAGGGAGCAATGGAGGCTG 2084 0.3704 MKPFAAMLPEISVWSIYLKLILLFYYVSLLGSQPSRVVSALGNETDYLALLKFKESISNYPSEILASWNSSTHFCNWHGITCSHRRQRVVELNLQSYELLGFISPHVGNLSFLRSIVLDNNRLKGEIPQELGRLFRLQQLSLANNTLSGKIPTNLTSCSKLRLLDLWRNAFVGKIPTEFCSLRKLEELSIDVNNLTGKIPNSIGNLSSLTTFWAGYNNLEGNIPDDISHLRNLTLIAVFGNNFFGSIPESLQEISVLNHLNVSFNMLDGKVPIEGVFKNASALSLIGNSRLCGGISELQLPPCPVKVTKKHHNFKLIIAITCVVIFLLLLSSILAIYLVRKRKKSSSTSAVEQASKVSYQCLQHATEGFSANNLIGSGSFGTVYKANLEPEYGVVAVKVLNLQKKGAHTSFIAECNALRNIRHRNLVKILTCCSSTDYKGKEFKALVFEYMANGSLEKWLHPGIESTNQPRTLSLVQRVNIITNVSSALHYLHNECEQPVIHCDLKPENVLLDHDMVAHVGDFGLARILSTINGISHMQVSSIGIKGTIGYAPPECGMGSDVSTQGDVYSFGILVLEMLTGRRPTEDMFKEGENLHGYVKNAYLDNLVQIVDPAIFHGELKLVAIAAEAEERDRRENPICMPPNVRDSLVSLFRIGLDCSVESPKERMSMANVIKELNLIRSSSPAAGGGSNGG 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01379 694 Pfam Leucine rich repeat N-terminal domain 44 83 IPR013210 -
Bva02g01379 694 SUPERFAMILY Protein kinase-like (PK-like) 345 677 IPR011009 -
Bva02g01379 694 Gene3D Ribonuclease Inhibitor 99 312 IPR032675 -
Bva02g01379 694 SUPERFAMILY L domain-like 43 293 - -
Bva02g01379 694 Pfam Protein kinase domain 371 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01379 694 ProSiteProfiles Protein kinase domain profile. 369 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01379 694 Gene3D Ribonuclease Inhibitor 37 98 IPR032675 -
Bva02g01379 694 PANTHER OS04G0122200 PROTEIN 31 245 - -
Bva02g01379 694 PANTHER OS04G0122200 PROTEIN 241 685 - -
Bva02g01379 694 SMART serkin_6 369 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g01379 694 PANTHER LRR RECEPTOR-LIKE KINASE 31 245 - -
Bva02g01379 694 PANTHER LRR RECEPTOR-LIKE KINASE 241 685 - -
Bva02g01379 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Bva02g01379 694 Gene3D Transferase(Phosphotransferase) domain 1 451 687 - -
Bva02g01379 694 Gene3D Phosphorylase Kinase; domain 1 332 450 - -
Bva02g01379 694 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01379 Bva-Chr2 17422759 17426568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01379 92 681 Receptor kinase-like Gene Family AT3G47570 44.224 1.07e-158 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva02g01379 Pkinase 7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01379 - - aip:107615138 674.085