Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01373 ATGGATCCCCGCTTACGGGGTTTTACTGGTTTCACAAATGGAATCCAACTGGGAAATCAATCTTTTCCAATTCTTCAGAACCAGAGCTTTGCTCCTGGACCTAGACTTGGAAACGCCATTGATAACAGTGGGGAGTTTCAGTACCTTGAATCTGATCTTATACCAGCTAACACACCTTCATCCTCAACCGTGACCCACGAGGAACATTCTCCGGAAGATTGTGAATTTTCTGATACCGTTTTGAGTTACATAAGTCAGATCCTTATGGAAGAAGAGGTGGAAGATAAGGGATGCATGCTTCAGGACTCCTTGCATCTTCAGGCAGCTGAGAAATCATTCTATGATGTACTAGGTGAAAAGTACCCTCCTTCACCTGATCGAAATCCTAGTCATATCAATCAAAATGATGGGGTCCTAGATAATGGTTTTTCTGGAAGTTATGGTAATTTTCTTAGTAACTATGGTGATATCAATGAAACTTTTGCAGAAAATTCCTTGCTTCAAGACCCTGGTGGAATTCCTTCACAAAGTACCCAACGTAATAGTATTTCAAAGTCATCTTATACTTCTTCCAGTAGTATAATGAGTACATTGAGTAGTTTGGAAGCGCCGGTGGACTCTCCGAACAGTCTGACCAGTGAGAGTCAATCCATTTGGCAATTTAGGAAAGGTATGGAGGAGGCTAGTAAGTTTCTTCCAAGTGGAAACGAACTGTTTGGTAATTTAAATGTAACTAATTTATTACCAAAAGAACCAAAAGTGGGGATTGCTGATAAGTCATTTAAGGTTGAGAAGGAAGAGTGTGAGTATTTTTCTGGTAGATCAAATGGAAGGAAGCATCCTTACCAGCAAGTGGGAGATTTTGAAGAAGAGAGGAGTAGCAAGCAAGCGGCAATATCCACAGAACCAACATTGCTGTCAAATATGTTTGATATAGTGCTGCTTCATAGTGCAGGAGAAGGTAAGGTCCATTTTTCAGCTCGTCGTGAGGCTTTGCAGAACAAGACCAGCAAGACAGTTGTGCCAAATGGTCAATCAAAAGTTTCCAACAGTGGGAAAGGACGtggtaagaaacaaaatgggaAAAAGGAAGTGGTTGATTTGAGGACGCTTCTAATCCTTTGTGCACAAGCTGTTGCGGCAGATGACCATAGGGGTGCGCATGAATTGCTGGGGCAGATTAGACGGCACTCTAGCCCCTTTGGGGATGGAAATCAGAGGTTGGCTCATGTCTTTGCTGATGGTCTTGAGGCACGCTTGGCTGGTACTGGTAGCCAGATTTATAAAGGACTTATAAGTAAAAGGAGGTCAACTGTTGATTATCTCAAGGCttattatcttttccttgCTGCATGTCCTTTCAGAAAGATTTCTGAGTTTATTTCAAATGTCAAAATAAGAACATCTGCAGTAAATTCACCAAGGGTCCATGTTATAGATTTTGGTATACTTTATGGTTTCCAGTGGCCCACCTTAATACAGAGAACTTCATGGAGAGAAGGAGGACCACCAAAGCTTCGAATTACTGGAATAGACTTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTTGAAGAAACTGGACGCCGCTTGGCCACCTATGCAGATACTTTCAACGTGCCATTTGAGTATACAGCCATTGCAAAGAAATGGGAAACTGTTCAACTTGAGGATCTCAAGATAGATAGGGATGAGTTCCTAGTTGTTACCTGTTTATATCGAGGTAAGAATTTGCTGGATGAATCTGTGGCAGTGGACAGTCCAAGAAATGTTTTCCTCAATTTGGTAAGGAAGATCAATCCAGATTTATTCATTCATGGAATTGTTAATGGGGCCTTTAATGCCCCTTTCTTCGTTACCCGATTCAGGGAGGCTCTATTTCACTATTCTTCGCTATTTGATATGCTGGAAACTATTGTACCTCGCGAGGACTGGGAGAGGATGCTGATTGAGAAGGAGGTATTTGGGAGGGAAGCATTGAATGTCATAGCTTGTGAGGGCTATGAGAGAGTGGAGAGACCAGAGACATATAAACAATGGCAAGCCCGTATTCTAAGGGCTGGTTTTATGCAGCTACCATTTCCTCGTGAGTTAGTGGCAAGGGCAATGGAGAAGGTAAGAACTTGCTACCATAAGGATTTTGTAATTGATGAAGATGGCCAGTGGTTGTTGCAAGGCTGGAAAGGGCGAATCATTTATGCTCTTTCTTGTTGGAAACCTGCTTG 2225 0.4189 MDPRLRGFTGFTNGIQLGNQSFPILQNQSFAPGPRLGNAIDNSGEFQYLESDLIPANTPSSSTVTHEEHSPEDCEFSDTVLSYISQILMEEEVEDKGCMLQDSLHLQAAEKSFYDVLGEKYPPSPDRNPSHINQNDGVLDNGFSGSYGNFLSNYGDINETFAENSLLQDPGGIPSQSTQRNSISKSSYTSSSSIMSTLSSLEAPVDSPNSLTSESQSIWQFRKGMEEASKFLPSGNELFGNLNVTNLLPKEPKVGIADKSFKVEKEECEYFSGRSNGRKHPYQQVGDFEEERSSKQAAISTEPTLLSNMFDIVLLHSAGEGKVHFSARREALQNKTSKTVVPNGQSKVSNSGKGRGKKQNGKKEVVDLRTLLILCAQAVAADDHRGAHELLGQIRRHSSPFGDGNQRLAHVFADGLEARLAGTGSQIYKGLISKRRSTVDYLKAYYLFLAACPFRKISEFISNVKIRTSAVNSPRVHVIDFGILYGFQWPTLIQRTSWREGGPPKLRITGIDFPQPGFRPAERVEETGRRLATYADTFNVPFEYTAIAKKWETVQLEDLKIDRDEFLVVTCLYRGKNLLDESVAVDSPRNVFLNLVRKINPDLFIHGIVNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEVFGREALNVIACEGYERVERPETYKQWQARILRAGFMQLPFPRELVARAMEKVRTCYHKDFVIDEDGQWLLQGWKGRIIYALSCWKPA 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01373 741 ProSiteProfiles GRAS family profile. 359 739 IPR005202 -
Bva02g01373 741 MobiDBLite consensus disorder prediction 165 188 - -
Bva02g01373 741 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 740 IPR005202 -
Bva02g01373 741 MobiDBLite consensus disorder prediction 334 362 - -
Bva02g01373 741 MobiDBLite consensus disorder prediction 334 355 - -
Bva02g01373 741 Pfam GRAS domain family 368 739 IPR005202 -
Bva02g01373 741 PANTHER SCARECROW-LIKE PROTEIN 9 43 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01373 Bva-Chr2 17403855 17407083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01373 72 740 GRAS Transcription Factor Family AT2G37650 55.117 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g01373 GRAS 2.5e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01373 - - gmx:100780785 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01373 02 17403855 17407083 Bva02g01373 02 17403855 17407083 ECH