Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01366 ATGAAGGAGAGGCAACGTTGGAGAGCTGAAGAAGACGCCTTATTACGTGCATATGTCAAGCAATATGGTCCCAGGGACTGGAATCTGGTGTCCCAGCGCATGAACACACCCCTTAACAGGGATGCTAAGTCTTGTTTAGAGAGGTGGAAGAACTATCTCAAGCCTGGCATCAAGAAGGGCTCTCTAACTGAAGAAGAGCAGCGACTTGTCATCCGCCTTCAAGCGAAACACGGTaacaaatggaagaaaattgcTGCTGAAGTTCCTGGTCGAACTGCCAAGAGGCTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAGCAgcagagagaaaagaaggagaatatCAAAGCAATTGATCCAATTGACGACAGCAAGTACGATAGAATACTAGAGACTTTTGCAGAGAAGCTGGTGAAAGAGCGCCCTGTTCCACCATATCTCATGGCCACTTCCAATGGTGCATTTCTGCATACAGATGCACCAGCCCCAGCAGCATCAGCTTTACTTCCTCCATGGCTTTCAAACTCAAATACCACCACACCCGTCAGACCTCCTTCCCCTTCTGTGACATTGAGCCTTTCTCCAACGGTGGCTGCACCACCATTTCCATGGTTGCAACCTGAAAGAGGACCAGAGAATGCTCCCCTTGTTTTGGCTAATGTAACACCACATGGACCCGTCCCCACTTTTGGCGATAACATGCTCATATCTGAATTGGCCGAGTGCTGCAAGGAGTTGGAAGAAGGGCATCGCGCTTGGGCAGCACACAGGAAGGAGGCTGCCTGGAGACTAAGGAGGGTGGAGTTGCAATTGGATTCCGAGAAGGCAAGCCGGAGAAGGGAGAAGATGGAAGAAATGGAAGCGAAGATTAAAGTTCTCAGGGAAGAACAGAAAACTGCATTGGATAGAATTGAAGCAGAATACAGGGAACAGTTGGCAGGACTAAGAAGAGATGCAGAAACCAAGGAGCAGAAGCTGGCCGAGCAATGGGTTGCAAAACACTCAAGGCTTACCAAGTTTCTTGAGCAGATAAGTTGTAGACCCAGGCTTGCCGAGCCAAatggaagatg 1070 0.471 MKERQRWRAEEDALLRAYVKQYGPRDWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKENIKAIDPIDDSKYDRILETFAEKLVKERPVPPYLMATSNGAFLHTDAPAPAASALLPPWLSNSNTTTPVRPPSPSVTLSLSPTVAAPPFPWLQPERGPENAPLVLANVTPHGPVPTFGDNMLISELAECCKELEEGHRAWAAHRKEAAWRLRRVELQLDSEKASRRREKMEEMEAKIKVLREEQKTALDRIEAEYREQLAGLRRDAETKEQKLAEQWVAKHSRLTKFLEQISCRPRLAEPNGR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01366 356 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 356 - -
Bva02g01366 356 PANTHER TRANSCRIPTION FACTOR AS1 1 356 IPR031055 GO:0005634|GO:0006351|GO:0010338
Bva02g01366 356 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Bva02g01366 356 CDD SANT 6 53 IPR001005 -
Bva02g01366 356 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Bva02g01366 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Bva02g01366 356 Coils Coil 266 303 - -
Bva02g01366 356 SMART sant 3 55 IPR001005 -
Bva02g01366 356 SMART sant 58 106 IPR001005 -
Bva02g01366 356 Gene3D - 4 58 - -
Bva02g01366 356 CDD SANT 63 104 IPR001005 -
Bva02g01366 356 Coils Coil 305 325 - -
Bva02g01366 356 Gene3D - 62 119 - -
Bva02g01366 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Bva02g01366 356 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Bva02g01366 356 Pfam Myb-like DNA-binding domain 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01366 Bva-Chr2 17319417 17322658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01366 1 347 MYB Transcription Factor Family AT2G37630 67.486 2.05e-165 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g01366 Myb_DNA-bind_6 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01366 K09422 - zju:107430642 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01366 02 17319417 17322658 Bva02g01366 02 17319417 17322658 ECH