Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01360 ATGAGCTCCACTTCTCCCGCCACCGCCACTTCTCTGCAAACAGAGAAGGACATGGCTGAGGGAAAATCAGAGGAGTGTTGTCTGGAGAATAAGCAATCTACCGCTGCTTCAAGCTCCTCTGTGTCTGAGGGAAGTGGTAGTATACACAAGTCTCCGGGGATAGGCAGCCCAGCATCTACATCACCTTCTCATCGGAGGACCACAGGCCCCATAAGGCGTGCAAAGGGCGGTTGGACAGCACAGGAGGATGAGACATTAAGGAATGCTGTTTCAGCTTATAAGGGAAAGAGTTGGAAGAAAATAGCTGAGTTTTTTCCAGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACTCAGGAGGAGGATGATAAAATTGTTGAACTGGTGTCAAAATATGGACCTACAAAATGGTCTTTGATAGCCAAGTCTTTGCCTGGTCGCATAGGGAAACAGTGCCGAGAGCGTTGGCATAATCATTTGAATCCGGAGATAAAGAAGGATGCTTGGACTTTAGAGGAGGAACTGGCCCTCATGAATGCTCATCGTCTTCATGGGAATAAATGGGCTGAAATAGCAAGGGTCTTACCTGGAAGGACTGATAATGCAATAAAAAACCACTGGAACAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTAGCTACAGGAAAACTTCCACCAATTCCTAAGGCCAGTCCTCAAGCTGGACGCTCTGCAACTAAAACAATACTGGTTTGTTCAAATAAAGGATTAGAGACAGCTCCTGAAACATCATCAGAAACTACAGACATTAGTAAGGTAGATGATAGTAGCAGGAATCATTTAGAGTCCTCTGCAACATTGAGAGATGTTGGCGATTCTTCAAATGTTCCTGCAAATGAATCTGCTGAGTCTGATTGTGTAGAATGCAAACCAGGATCAGCCAATGTAGATCTCAGCTGCAACAACTCAGAACCAGTGTCTAAAGATAATTTTGCAATGAATGCTGAACCAAAACTTGAGGACTCTGGGCTCCAAAACTGTATAAATAATGTTGAAATGAGCGGTAATGGGTTAGTCAGAACATCTCTTTCACTGGAAAGTCCTACTAGTGGTTCTTTGTGTTATGAGCCTCCACAGTTAGAGAGTTCTCTTCCTCTGGATTCTCtttgtttaaatatgttttgcCTGCAAAATGGATACAGCTCAAGTCCAACAATGTCACCTGTTGGTTTCTTCACTCCACCTTGTGTGAAGGGTAGCGAACTATACTCTCTGTCTCCTGaatcaatattaaaatatgctGCTAGAACTTTCCCGAATACTCCTTCCATATTGAGAAAGAGGAGGACTAGAGTCCAAACACATGCCACTCCCAGTAAATTTACCAAGATAGATGGGGAAACTCATACTTCTAATGAACAGGAGAGAAGCAAAGATAATTCTGGTTCTGAAGCGGGTAGTTTGTGTGAGAGTCCAGCAAGTCATGGAAATACAATTGAGGTTCCAAATTATAAGGCTTTCAATGCATCTCCTCCATACCGGTTAAGACCCAAGCGAACAGCAGTTGTCAAGTCTGTGGAAAAGCAGCTTGAGTTTGCATTTGACAAAGAGAAACAAGATGCTATTGTCAACACAACGGAAAAATCTGCTAAAAGGAGCACTTCAATGACTGAAGAGTGTTTGCGTGAAGCAAAACTGGGAGTGACCTA 1727 0.4233 MSSTSPATATSLQTEKDMAEGKSEECCLENKQSTAASSSSVSEGSGSIHKSPGIGSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVSAYKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHRLHGNKWAEIARVLPGRTDNAIKNHWNSSLKKKLDFYLATGKLPPIPKASPQAGRSATKTILVCSNKGLETAPETSSETTDISKVDDSSRNHLESSATLRDVGDSSNVPANESAESDCVECKPGSANVDLSCNNSEPVSKDNFAMNAEPKLEDSGLQNCINNVEMSGNGLVRTSLSLESPTSGSLCYEPPQLESSLPLDSLCLNMFCLQNGYSSSPTMSPVGFFTPPCVKGSELYSLSPESILKYAARTFPNTPSILRKRRTRVQTHATPSKFTKIDGETHTSNEQERSKDNSGSEAGSLCESPASHGNTIEVPNYKAFNASPPYRLRPKRTAVVKSVEKQLEFAFDKEKQDAIVNTTEKSAKRSTSMTEECLREAKLGVT 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01360 575 MobiDBLite consensus disorder prediction 274 288 - -
Bva02g01360 575 MobiDBLite consensus disorder prediction 263 312 - -
Bva02g01360 575 MobiDBLite consensus disorder prediction 487 502 - -
Bva02g01360 575 CDD SANT 129 173 IPR001005 -
Bva02g01360 575 Gene3D - 127 178 - -
Bva02g01360 575 MobiDBLite consensus disorder prediction 1 82 - -
Bva02g01360 575 ProSiteProfiles Myb-like domain profile. 122 173 IPR001005 -
Bva02g01360 575 SUPERFAMILY Homeodomain-like 124 220 IPR009057 -
Bva02g01360 575 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 228 IPR017930 -
Bva02g01360 575 Gene3D - 180 242 - -
Bva02g01360 575 SUPERFAMILY Homeodomain-like 76 131 IPR009057 -
Bva02g01360 575 MobiDBLite consensus disorder prediction 472 486 - -
Bva02g01360 575 ProSiteProfiles Myb-like domain profile. 70 121 IPR001005 -
Bva02g01360 575 PANTHER MYB-RELATED PROTEIN B-LIKE 40 490 - -
Bva02g01360 575 CDD SANT 181 224 IPR001005 -
Bva02g01360 575 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 177 IPR017930 -
Bva02g01360 575 Pfam Myb-like DNA-binding domain 179 222 IPR001005 -
Bva02g01360 575 Pfam Myb-like DNA-binding domain 75 121 IPR001005 -
Bva02g01360 575 Pfam Myb-like DNA-binding domain 127 173 IPR001005 -
Bva02g01360 575 ProSiteProfiles Myb-like domain profile. 174 224 IPR001005 -
Bva02g01360 575 MobiDBLite consensus disorder prediction 1 16 - -
Bva02g01360 575 MobiDBLite consensus disorder prediction 28 67 - -
Bva02g01360 575 Gene3D - 74 126 - -
Bva02g01360 575 MobiDBLite consensus disorder prediction 289 307 - -
Bva02g01360 575 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 121 IPR017930 -
Bva02g01360 575 PANTHER MYB PROTEIN-RELATED 40 490 - -
Bva02g01360 575 SMART sant 74 123 IPR001005 -
Bva02g01360 575 SMART sant 126 175 IPR001005 -
Bva02g01360 575 SMART sant 178 226 IPR001005 -
Bva02g01360 575 CDD SANT 78 121 IPR001005 -
Bva02g01360 575 MobiDBLite consensus disorder prediction 450 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01360 Bva-Chr2 17267088 17272666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01360 12 554 MYB Transcription Factor Family AT3G09370 48.732 1.94e-155 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva02g01360 Myb_DNA-binding 6.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01360 K09422 - gmx:778081 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00498 01 3894338 3898816 Bva02g01360 02 17267088 17272666 BWGD
Bva02g01360 02 17267088 17272666 Bva02g01360 02 17267088 17272666 ECH