Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01351 ATGGGAAAGCATGTACAATACACAGATTCTGATTCATATTGGGAAAGTGCTGGTGCAGACTGCAGTTACTTCATTCTTCATATTATTAAGAGTAAATCCTGGTTTAATTTGAAGAAACGAATCAAACAAAAGACGCGTAGCAGCAACAGAAGAAGTGTTTCTAGAAAAGATGGTTCCTCCTATCCTGGCAAACCTGTAAGTTCTTCAGCAGAAAAAAGTTTAGGGAGCCAGATAAAAGCACTTATTAACAAAGAGGTATACAGAAGGAAGAGCAAACATCATAGGAGTTCTACCTGTCCTCCTAATGTTTTGCCTCATGATTTGGAGGCTTCAAATATTGATTCCAGTGCAGAAACTGTAAGAACTAATGGAAGTATGATGGTGATTCCTGAATCGAGTCccagaaagaaaatgtctCTTGGTGATTACTTGTATGATTTTATCCAAGAGAATATGAAAGATAAAAGACAAGATACAGTGGAAAATAAGCTGATAAATGCAGAGAAACCTGTGACAGATGCTTCAGCTAATGTATACAAGGATTTTCTGGGTTCTGTGGATACAATCAACCTAAACCAGGACTTAATATCAACAGTTGTGCAAGACCCAGAATTTCCTTTGGCAAAAGGGGGAGAAACTCCTTGCATTGTTCAAGAAGGAACTGTATTGTCAGTAGCAGAATACAGATCAGGAGGAATATCGGACCAGAATCCCACTATAGTTAAGCATGTAACTGGAGaatctagaaaagaaaagcattgtATTGTTATGGATGCTATCCTTCATAAAGTTCCTCAAGGCCATAGGATTTCTGATGAGTTGAAGGAtaagattttaagaaaattgacaTACCCTATTCGTCCTAAAGAAGATAAAGACAGTCATGCGAGTGGTTATGAGAGTGATTTCTATGCTCATTCCCTTAACAAGCATCACCAAAGGACATCATCTCTTACTTCGCTAGACAGATATTCTCAACTGTATGAGATCAGCTTTAACAGAAATGCCAAACATCCTCAGTCGGAGCGACTGAATTTAAGAACAGAAGGAGAACATACACCATTAAGGACGAGAAAATCCTTGGGAAGGATATCTTCATTACCTGATCTCCAATCTTATTCCAACTCCTTCCACAATGAGGAGTTTTCTAATTGCAGCTCACCAGCTATGTCTTCTGGGTATAGCACTATGAGCCTAAGAAGTAGTGCTTATGCACAACAAGGTTCCGAAGTTGACATAAATGCAGAAAGTCCATTGCAGTTAGATACACCAATCAATAATATGATGCAAGAAAACTTTAACAAAGTTGGTGAGGATGATTCCgttattggtaataatttggAGCCAGGATCAGATTCTAATGATGAGATAAATACCATAATAGCCGATGATATTGGCCCCACTACATCAAAGAATGGTGCTGCTTTTGTTGAAAAGGATGTTGGGCAAATAGAAAGATTTAAGGATGCAGCAGCAGCTTCAGATGGTGACTTGACaacaaaagattcaaaatcaAAGCCAGGGCTCTTTGATAGGCTGGAAGATGTGGTTGagcaaaaagaagatattctAGTCCCAACTAAAATGACTGAGACCATagagaattttcaaaatatagaaAGTCTAAGGAAGCACTTGAAACATGAAATTTCCCATTTTCACTTGGACACCAAAGACAAAGCAAAGTTCAATTATATGAGAGATTTATTGGAGCAATCTAGATTCATTGGCAACGAGTTCCTCCAGGCCTGGCATTCTGATGATCTGCCACTAGATCAATCAGTCTACAAAGAAATGGAATGTGATCCTCAACAAGGTTGTGATTTTGATCACCAATTCTTGTTTGATTTAACCAATGAAGTACTAATGGAGATTTATGGGAAATCATGCGGCTACTGTCCTTTAAGATTGTCTTCTGTTTCCCACAGTCGTCCAATGTGGGTAGAGAGACATGTTCTCCATGAAGTGTGGACTCATATAAACCGCTATCTGAACTCAAAATCCAAGCTTGATCAATCAATAGACGAAGCTGTAAGTCTAGATTTAGCAAAAGCAGATGAATGGGTAAATCCGCAGTTCAATATGGAATGTATGGCATTGGAGATTGAAGAGTCAATACTTCATGATCTTTTAGAGGAAATACTGTATGCATA 2153 0.3655 MGKHVQYTDSDSYWESAGADCSYFILHIIKSKSWFNLKKRIKQKTRSSNRRSVSRKDGSSYPGKPVSSSAEKSLGSQIKALINKEVYRRKSKHHRSSTCPPNVLPHDLEASNIDSSAETVRTNGSMMVIPESSPRKKMSLGDYLYDFIQENMKDKRQDTVENKLINAEKPVTDASANVYKDFLGSVDTINLNQDLISTVVQDPEFPLAKGGETPCIVQEGTVLSVAEYRSGGISDQNPTIVKHVTGESRKEKHCIVMDAILHKVPQGHRISDELKDKILRKLTYPIRPKEDKDSHASGYESDFYAHSLNKHHQRTSSLTSLDRYSQLYEISFNRNAKHPQSERLNLRTEGEHTPLRTRKSLGRISSLPDLQSYSNSFHNEEFSNCSSPAMSSGYSTMSLRSSAYAQQGSEVDINAESPLQLDTPINNMMQENFNKVGEDDSVIGNNLEPGSDSNDEINTIIADDIGPTTSKNGAAFVEKDVGQIERFKDAAAASDGDLTTKDSKSKPGLFDRLEDVVEQKEDILVPTKMTETIENFQNIESLRKHLKHEISHFHLDTKDKAKFNYMRDLLEQSRFIGNEFLQAWHSDDLPLDQSVYKEMECDPQQGCDFDHQFLFDLTNEVLMEIYGKSCGYCPLRLSSVSHSRPMWVERHVLHEVWTHINRYLNSKSKLDQSIDEAVSLDLAKADEWVNPQFNMECMALEIEESILHDLLEEILYA 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01351 717 PANTHER PROTEIN TRM32 146 209 IPR044257 -
Bva02g01351 717 PANTHER TRM32-LIKE PROTEIN (DUF3741) 146 209 - -
Bva02g01351 717 Pfam Domain of unknown function (DUF4378) 563 713 IPR025486 -
Bva02g01351 717 MobiDBLite consensus disorder prediction 340 358 - -
Bva02g01351 717 MobiDBLite consensus disorder prediction 337 363 - -
Bva02g01351 717 MobiDBLite consensus disorder prediction 40 74 - -
Bva02g01351 717 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 110 - -
Bva02g01351 717 PANTHER TRM32-LIKE PROTEIN (DUF3741) 241 716 - -
Bva02g01351 717 MobiDBLite consensus disorder prediction 88 108 - -
Bva02g01351 717 PANTHER PROTEIN TRM32 1 110 IPR044257 -
Bva02g01351 717 PANTHER PROTEIN TRM32 241 716 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01351 Bva-Chr2 17233580 17237305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01351 173 707 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.686 5.14e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01351 - - gmx:121174644 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01351 02 17233580 17237305 Bva02g01351 02 17233580 17237305 ECH